ENSG00000177455


Homo sapiens

Features
Gene ID: ENSG00000177455
  
Biological name :CD19
  
Synonyms : CD19 / CD19 molecule / P15391
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p11.2
Gene start: 28931939
Gene end: 28939346
  
Corresponding Affymetrix probe sets: 206398_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000313419
Ensembl peptide - ENSP00000437940
Ensembl peptide - ENSP00000456201
NCBI entrez gene - 930     See in Manteia.
OMIM - 107265
RefSeq - XM_017023893
RefSeq - NM_001178098
RefSeq - NM_001770
RefSeq - XM_006721103
RefSeq Peptide - NP_001171569
RefSeq Peptide - NP_001761
swissprot - P15391
Ensembl - ENSG00000177455
  
Related genetic diseases (OMIM): 613493 - Immunodeficiency, common variable, 3, 613493
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Cd19ENSMUSG00000030724Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006968 cellular defense response TAS
 biological_processGO:0007166 cell surface receptor signaling pathway TAS
 biological_processGO:0030449 regulation of complement activation TAS
 biological_processGO:0046854 phosphatidylinositol phosphorylation IEA
 biological_processGO:0050776 regulation of immune response TAS
 biological_processGO:0050853 B cell receptor signaling pathway IEA
 biological_processGO:0051281 positive regulation of release of sequestered calcium ion into cytosol IEA
 biological_processGO:0051897 positive regulation of protein kinase B signaling TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005057 obsolete signal transducer activity, downstream of receptor TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046934 phosphatidylinositol-4,5-bisphosphate 3-kinase activity TAS


Pathways (from Reactome)
Pathway description
PIP3 activates AKT signaling
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
Constitutive Signaling by Aberrant PI3K in Cancer
PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
Regulation of Complement cascade
Antigen activates B Cell Receptor (BCR) leading to generation of second messengers


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
Show

 HP:0000389 Chronic otitis media 
Show

 HP:0000403 Recurrent otitis media 
Show

 HP:0000509 Conjunctivitis "Inflammation of the conjunctiva." [HPO:curators]
Show

 HP:0000979 Purpura 
Show

 HP:0001287 Meningitis 
Show

 HP:0001531 Failure to thrive in infancy 
Show

 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
Show

 HP:0001878 Hemolytic anemia 
Show

 HP:0001888 Lymphopenia 
Show

 HP:0001973 Immune thrombocytopenia 
Show

 HP:0002014 Diarrhea 
Show

 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
Show

 HP:0002090 Pneumonia 
Show

 HP:0002091 Restrictive lung disease 
Show

 HP:0002097 Emphysema 
Show

 HP:0002110 Bronchiectasis 
Show

 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
Show

 HP:0002633 Vasculitis 
Show

 HP:0002664 Neoplasia "An organ or organ-system abnormality that consists of uncontrolled autonomous cell-proliferation which can occur in any part of the body as a benign or malignant tumour or neoplasm." [HPO:curators]
Show

 HP:0002665 Lymphoma "A cancer originating in lymphocytes and presenting as a solid tumor of lymhpoid cells." [HPO:curators]
Show

 HP:0002716 Lymphadenopathy 
Show

 HP:0002718 Recurrent bacterial infections 
Show

 HP:0002720 Decreased IgA 
Show

 HP:0002721 Immunodeficiency 
Show

 HP:0002829 Arthralgia 
Show

 HP:0002837 Bronchitis 
Show

 HP:0002850 Decreased IgM 
Show

 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
Show

 HP:0002960 Autoimmune disease 
Show

 HP:0004313 Reduced immunoglobulin levels 
Show

 HP:0004315 Decreased IgG level "An abnormally decreased level of immunoglobulin G in blood." [HPO:probinson]
Show

 HP:0005435 Impaired T cell function 
Show

 HP:0006532 Pneumonia, recurrent episodes 
Show

 HP:0006783 Posterior pharyngeal cleft 
Show

 HP:0011108 Recurrent sinusitis "A `recurrent` (PATO:0000427) form of `sinusitis` (HP:0000246)." [HPO:probinson]
Show

 HP:0100723 Gastrointestinal stroma tumor 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000110651 CD81 / P60033 / CD81 molecule  / complex
 ENSG00000141968 VAV1 / P15498 / vav guanine nucleotide exchange factor 1  / complex
 ENSG00000177885 GRB2 / P62993 / growth factor receptor bound protein 2  / reaction / complex
 ENSG00000145675 P27986 / PIK3R1 / phosphoinositide-3-kinase regulatory subunit 1  / complex / reaction
 ENSG00000125730 C3 / P01024 / complement C3  / complex / reaction
 ENSG00000117322 CR2 / P20023 / complement C3d receptor 2  / reaction / complex
 ENSG00000185885 IFITM1 / P13164 / interferon induced transmembrane protein 1  / complex
 ENSG00000171608 O00329 / PIK3CD / phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr