ENSG00000177971


Homo sapiens

Features
Gene ID: ENSG00000177971
  
Biological name :IMP3
  
Synonyms : IMP3 / IMP3, U3 small nucleolar ribonucleoprotein / Q9NV31
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q24.2
Gene start: 75639085
Gene end: 75648706
  
Corresponding Affymetrix probe sets: 221688_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000385217
Ensembl peptide - ENSP00000326981
NCBI entrez gene - 55272     See in Manteia.
OMIM - 612980
RefSeq - NM_018285
RefSeq Peptide - NP_060755
swissprot - Q9NV31
Ensembl - ENSG00000177971
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 imp3ENSDARG00000115266Danio rerio
 Imp3ENSMUSG00000032288Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001912  Ribosomal protein S4/S9, N-terminal
 IPR002942  RNA-binding S4 domain
 IPR022801  Ribosomal protein S4/S9
 IPR036986  RNA-binding S4 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034457 Mpp10 complex IDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0030515 snoRNA binding IBA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000136718 IMP4 / Q96G21 / IMP4, U3 small nucleolar ribonucleoprotein  / complex
 ENSG00000124383 O00566 / MPHOSPH10 / M-phase phosphoprotein 10  / complex






 

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contact: otassy@igbmc.fr