ENSG00000136718


Homo sapiens

Features
Gene ID: ENSG00000136718
  
Biological name :IMP4
  
Synonyms : IMP4 / IMP4, U3 small nucleolar ribonucleoprotein / Q96G21
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q21.1
Gene start: 130342225
Gene end: 130347810
  
Corresponding Affymetrix probe sets: 212411_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386716
Ensembl peptide - ENSP00000386411
Ensembl peptide - ENSP00000389701
Ensembl peptide - ENSP00000416756
Ensembl peptide - ENSP00000409371
Ensembl peptide - ENSP00000259239
NCBI entrez gene - 92856     See in Manteia.
OMIM - 612981
RefSeq - NM_001320306
RefSeq - NM_001320304
RefSeq - NM_001320305
RefSeq - NM_001320307
RefSeq - NM_001320309
RefSeq - NM_001320310
RefSeq - NM_001320311
RefSeq - NM_033416
RefSeq Peptide - NP_219484
RefSeq Peptide - NP_001307239
RefSeq Peptide - NP_001307233
RefSeq Peptide - NP_001307235
RefSeq Peptide - NP_001307236
RefSeq Peptide - NP_001307238
RefSeq Peptide - NP_001307234
RefSeq Peptide - NP_001307240
swissprot - B8ZZ47
swissprot - Q96G21
swissprot - E7ENR5
swissprot - B9A008
swissprot - F8WCN0
swissprot - H0Y714
Ensembl - ENSG00000136718
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 imp4ENSDARG00000054540Danio rerio
 IMP4ENSGALG00000029152Gallus gallus
 Imp4ENSMUSG00000026127Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007109  Brix domain
 IPR036621  Anticodon-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing NAS
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034457 Mpp10 complex IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030515 snoRNA binding IBA
 molecular_functionGO:0042134 rRNA primary transcript binding IBA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000177971 IMP3 / Q9NV31 / IMP3, U3 small nucleolar ribonucleoprotein  / complex
 ENSG00000124383 O00566 / MPHOSPH10 / M-phase phosphoprotein 10  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr