ENSMUSG00000026127


Mus musculus

Features
Gene ID: ENSMUSG00000026127
  
Biological name :Imp4
  
Synonyms : Imp4 / Q8VHZ7 / U3 small nucleolar ribonucleoprotein protein IMP4
  
Possible biological names infered from orthology : IMP4, U3 small nucleolar ribonucleoprotein / Q96G21
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: B
Gene start: 34439851
Gene end: 34449356
  
Corresponding Affymetrix probe sets: 10345357 (MoGene1.0st)   10345368 (MoGene1.0st)   1426213_at (Mouse Genome 430 2.0 Array)   1426214_at (Mouse Genome 430 2.0 Array)   1455723_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121452
Ensembl peptide - ENSMUSP00000141982
Ensembl peptide - ENSMUSP00000027303
Ensembl peptide - ENSMUSP00000120823
NCBI entrez gene - 27993     See in Manteia.
MGI - MGI:106572
RefSeq - NM_178601
RefSeq Peptide - NP_848716
swissprot - D6RCI8
swissprot - F6VY64
swissprot - Q8VHZ7
Ensembl - ENSMUSG00000026127
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 imp4ENSDARG00000054540Danio rerio
 IMP4ENSGALG00000029152Gallus gallus
 IMP4ENSG00000136718Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007109  Brix domain
 IPR036621  Anticodon-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034457 Mpp10 complex IBA
 molecular_functionGO:0003723 RNA binding ISA
 molecular_functionGO:0030515 snoRNA binding IBA
 molecular_functionGO:0030519 snoRNP binding ISA
 molecular_functionGO:0042134 rRNA primary transcript binding IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000032288 Imp3 / Q921Y2 / U3 small nucleolar ribonucleoprotein protein IMP3 / Q9NV31* / IMP3, U3 small nucleolar ribonucleoprotein*  / complex
 ENSMUSG00000030521 Q810V0 / Mphosph10 / U3 small nucleolar ribonucleoprotein protein MPP10 / O00566* / M-phase phosphoprotein 10*  / complex






 

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contact: otassy@igbmc.fr