ENSG00000178662


Homo sapiens

Features
Gene ID: ENSG00000178662
  
Biological name :CSRNP3
  
Synonyms : CSRNP3 / cysteine and serine rich nuclear protein 3 / Q8WYN3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q24.3
Gene start: 165469647
Gene end: 165689407
  
Corresponding Affymetrix probe sets: 1558121_at (Human Genome U133 Plus 2.0 Array)   1558122_s_at (Human Genome U133 Plus 2.0 Array)   220462_at (Human Genome U133 Plus 2.0 Array)   235017_s_at (Human Genome U133 Plus 2.0 Array)   235018_at (Human Genome U133 Plus 2.0 Array)   235355_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386278
Ensembl peptide - ENSP00000412081
Ensembl peptide - ENSP00000387195
Ensembl peptide - ENSP00000318258
Ensembl peptide - ENSP00000344042
NCBI entrez gene - 80034     See in Manteia.
RefSeq - XM_005246865
RefSeq - NM_001172173
RefSeq - NM_024969
RefSeq Peptide - NP_001165644
RefSeq Peptide - NP_079245
swissprot - Q8WYN3
swissprot - E7EN18
swissprot - B8ZZD9
swissprot - J3KQ49
Ensembl - ENSG00000178662
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSRNP3ENSDARG00000079741Danio rerio
 CSRNP3ENSGALG00000010971Gallus gallus
 Csrnp3ENSMUSG00000044647Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CSRNP2 / Q9H175 / cysteine and serine rich nuclear protein 2ENSG0000011092544
CSRNP1 / Q96S65 / cysteine and serine rich nuclear protein 1ENSG0000014465533


Protein motifs (from Interpro)
Interpro ID Name
 IPR023260  Cysteine/serine-rich nuclear protein family
 IPR031972  Cysteine/serine-rich nuclear protein, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0010923 negative regulation of phosphatase activity IDA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus ISS
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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