ENSMUSG00000044647


Mus musculus

Features
Gene ID: ENSMUSG00000044647
  
Biological name :Csrnp3
  
Synonyms : Csrnp3 / Cysteine/serine-rich nuclear protein 3 / P59055
  
Possible biological names infered from orthology : cysteine and serine rich nuclear protein 3 / Q8WYN3
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: C1.3
Gene start: 65845767
Gene end: 66031546
  
Corresponding Affymetrix probe sets: 10472408 (MoGene1.0st)   1453538_at (Mouse Genome 430 2.0 Array)   1455516_at (Mouse Genome 430 2.0 Array)   1456336_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000135605
Ensembl peptide - ENSMUSP00000055719
Ensembl peptide - ENSMUSP00000108013
Ensembl peptide - ENSMUSP00000117533
Ensembl peptide - ENSMUSP00000135019
Ensembl peptide - ENSMUSP00000135151
NCBI entrez gene - 77771     See in Manteia.
MGI - MGI:1925021
RefSeq - XM_006500403
RefSeq - NM_001290665
RefSeq - NM_001290666
RefSeq - NM_153409
RefSeq - NM_178634
RefSeq - XM_006500402
RefSeq Peptide - NP_001277595
RefSeq Peptide - NP_700458
RefSeq Peptide - NP_848749
RefSeq Peptide - NP_001277594
swissprot - P59055
swissprot - H3BJW4
Ensembl - ENSMUSG00000044647
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSRNP3ENSDARG00000079741Danio rerio
 CSRNP3ENSGALG00000010971Gallus gallus
 CSRNP3ENSG00000178662Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Csrnp2 / Q8BGQ2 / Cysteine/serine-rich nuclear protein 2 / Q9H175* / cysteine and serine rich nuclear protein 2*ENSMUSG0000004463642
Csrnp1 / P59054 / Mus musculus cysteine-serine-rich nuclear protein 1 (Csrnp1), transcript variant 3, mRNA. / Q96S65* / cysteine and serine rich nuclear protein 1*ENSMUSG0000003251532


Protein motifs (from Interpro)
Interpro ID Name
 IPR023260  Cysteine/serine-rich nuclear protein family
 IPR031972  Cysteine/serine-rich nuclear protein, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0010923 negative regulation of phosphatase activity ISS
 biological_processGO:0043065 positive regulation of apoptotic process IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002082 postnatal lethality "premature death anytime after postnatal day 1 to weaning age (3 weeks)" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Csrnp3tm1Jni/Csrnp3tm1Jni,Csrnp2tm1Jni/Csrnp2tm1Jni
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011086 partial postnatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms anytime between the neonatal period and weaning age (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Actbtm1Npa/Actbtm1Npa
Genetic Background: involves: BALB/cJ

Allelic Composition: Csrnp3tm1Jni/Csrnp3tm1Jni,Csrnp2tm1Jni/Csrnp2tm1Jni
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr