ENSG00000178804


Homo sapiens

Features
Gene ID: ENSG00000178804
  
Biological name :H1FOO
  
Synonyms : H1FOO / H1 histone family member O oocyte specific / Q8IZA3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q22.1
Gene start: 129543214
Gene end: 129551467
  
Corresponding Affymetrix probe sets: 1553064_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000319799
Ensembl peptide - ENSP00000422964
NCBI entrez gene - 132243     See in Manteia.
RefSeq - XM_017005733
RefSeq - NM_001308262
RefSeq - NM_153833
RefSeq Peptide - NP_722575
RefSeq Peptide - NP_001295191
swissprot - Q8IZA3
Ensembl - ENSG00000178804
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 h1mENSDARG00000102892Danio rerio
 H1fooENSMUSG00000042279Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HP1BP3 / Q5SSJ5 / heterochromatin protein 1 binding protein 3ENSG0000012748323


Protein motifs (from Interpro)
Interpro ID Name
 IPR005818  Linker histone H1/H5, domain H15
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0016584 nucleosome positioning ISS
 biological_processGO:0044030 regulation of DNA methylation ISS
 biological_processGO:0051321 meiotic cell cycle IEA
 biological_processGO:2000737 negative regulation of stem cell differentiation ISS
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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