ENSG00000127483


Homo sapiens

Features
Gene ID: ENSG00000127483
  
Biological name :HP1BP3
  
Synonyms : heterochromatin protein 1 binding protein 3 / HP1BP3 / Q5SSJ5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.12
Gene start: 20742661
Gene end: 20787323
  
Corresponding Affymetrix probe sets: 1554251_at (Human Genome U133 Plus 2.0 Array)   220633_s_at (Human Genome U133 Plus 2.0 Array)   224591_at (Human Genome U133 Plus 2.0 Array)   224592_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000391281
Ensembl peptide - ENSP00000405362
Ensembl peptide - ENSP00000403039
Ensembl peptide - ENSP00000402754
Ensembl peptide - ENSP00000402096
Ensembl peptide - ENSP00000401874
Ensembl peptide - ENSP00000397656
Ensembl peptide - ENSP00000391721
Ensembl peptide - ENSP00000312625
Ensembl peptide - ENSP00000364139
Ensembl peptide - ENSP00000364142
NCBI entrez gene - 50809     See in Manteia.
OMIM - 616072
RefSeq - XM_005245877
RefSeq - XM_005245878
RefSeq - XM_005245879
RefSeq - XM_011541532
RefSeq - XM_011541533
RefSeq - XM_011541534
RefSeq - XM_017001393
RefSeq - XM_017001394
RefSeq - NM_016287
RefSeq - XM_005245875
RefSeq - XM_005245876
RefSeq Peptide - NP_057371
swissprot - X6RGJ2
swissprot - B0QZK8
swissprot - B0QZK7
swissprot - B0QZK6
swissprot - B0QZK5
swissprot - B0QZK4
swissprot - Q5SSJ5
swissprot - Q5SWC8
swissprot - B0QZK9
Ensembl - ENSG00000127483
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hp1bp3ENSDARG00000044669Danio rerio
 HP1BP3ENSGALG00000010079Gallus gallus
 Hp1bp3ENSMUSG00000028759Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
H1FOO / Q8IZA3 / H1 histone family member O oocyte specificENSG0000017880415


Protein motifs (from Interpro)
Interpro ID Name
 IPR005818  Linker histone H1/H5, domain H15
 IPR005819  Histone H5
 IPR033061  Heterochromatin protein 1-binding protein 3
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0042127 regulation of cell proliferation IMP
 biological_processGO:0070828 heterochromatin organization IEA
 biological_processGO:0071456 cellular response to hypoxia IDA
 biological_processGO:0097298 regulation of nucleus size IMP
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0016607 nuclear speck IDA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031491 nucleosome binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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