ENSGALG00000010079


Gallus gallus

Features
Gene ID: ENSGALG00000010079
  
Biological name :HP1BP3
  
Synonyms : heterochromatin protein 1-binding protein 3 / HP1BP3
  
Possible biological names infered from orthology : Mus musculus heterochromatin protein 1, binding protein 3 (Hp1bp3), transcript variant 9, mRNA. / Q3TEA8 / Q5SSJ5
  
Species: Gallus gallus
  
Chr. number: 21
Strand: 1
Band:
Gene start: 6743532
Gene end: 6763535
  
Corresponding Affymetrix probe sets: Gga.10189.1.S1_at (Chicken Array)   Gga.4755.2.S1_at (Chicken Array)   Gga.4755.2.S1_s_at (Chicken Array)   Gga.9601.1.S1_at (Chicken Array)   GgaAffx.11654.1.S1_s_at (Chicken Array)   GgaAffx.6330.1.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000062313
Ensembl peptide - ENSGALP00000016363
NCBI entrez gene - 425543     See in Manteia.
RefSeq - XM_015297255
RefSeq - NM_001006560
RefSeq - XM_015297254
RefSeq Peptide - NP_001006560
swissprot - F1N8H6
swissprot - A0A1L1RU19
Ensembl - ENSGALG00000010079
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hp1bp3ENSDARG00000044669Danio rerio
 HP1BP3ENSG00000127483Homo sapiens
 Hp1bp3ENSMUSG00000028759Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005818  Linker histone H1/H5, domain H15
 IPR011991  ArsR-like helix-turn-helix domain
 IPR033061  Heterochromatin protein 1-binding protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0070828 heterochromatin organization IEA
 biological_processGO:0071456 cellular response to hypoxia IEA
 biological_processGO:0097298 regulation of nucleus size IEA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0031491 nucleosome binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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