ENSG00000178928


Homo sapiens

Features
Gene ID: ENSG00000178928
  
Biological name :TPRX1
  
Synonyms : Q8N7U7 / tetrapeptide repeat homeobox 1 / TPRX1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.33
Gene start: 47801243
Gene end: 47819051
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000323455
Ensembl peptide - ENSP00000438832
Ensembl peptide - ENSP00000438712
NCBI entrez gene - 284355     See in Manteia.
OMIM - 611166
RefSeq - NM_198479
RefSeq Peptide - NP_940881
swissprot - D2CFI5
swissprot - B7ZMM8
swissprot - Q8N7U7
Ensembl - ENSG00000178928
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mxtx1ENSDARG00000069382Danio rerio
 mxtx2ENSDARG00000015906Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HESX1 / Q9UBX0 / HESX homeobox 1ENSG000001636664


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr