ENSG00000180035


Homo sapiens

Features
Gene ID: ENSG00000180035
  
Biological name :ZNF48
  
Synonyms : Q96MX3 / zinc finger protein 48 / ZNF48
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p11.2
Gene start: 30378106
Gene end: 30400108
  
Corresponding Affymetrix probe sets: 227470_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000435674
Ensembl peptide - ENSP00000480262
Ensembl peptide - ENSP00000479658
Ensembl peptide - ENSP00000324056
Ensembl peptide - ENSP00000432548
NCBI entrez gene - 197407     See in Manteia.
RefSeq - NM_001214906
RefSeq - NM_001214907
RefSeq - NM_001214909
RefSeq - NM_152652
RefSeq Peptide - NP_001311423
RefSeq Peptide - NP_689865
RefSeq Peptide - NP_001201835
RefSeq Peptide - NP_001201836
RefSeq Peptide - NP_001201838
swissprot - A0A087WVT1
swissprot - Q96MX3
swissprot - E9PQ92
swissprot - E9PJ50
Ensembl - ENSG00000180035
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q3US17ENSMUSG00000045598Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr