ENSMUSG00000045598


Mus musculus

Features
Gene ID: ENSMUSG00000045598
  
Biological name :Zfp553
  
Synonyms : Q3US17 / Zfp553 / zinc finger protein 553
  
Possible biological names infered from orthology : Q96MX3 / zinc finger protein 48 / ZNF48
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: F3
Gene start: 127233061
Gene end: 127238179
  
Corresponding Affymetrix probe sets: 10557585 (MoGene1.0st)   1426563_at (Mouse Genome 430 2.0 Array)   1426564_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000060967
Ensembl peptide - ENSMUSP00000101919
NCBI entrez gene - 233887     See in Manteia.
MGI - MGI:2384725
RefSeq - XM_006507740
RefSeq - NM_146201
RefSeq - XM_006507739
RefSeq Peptide - NP_666313
swissprot - Q3US17
Ensembl - ENSMUSG00000045598
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNF48ENSG00000180035Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
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Allelic Composition: Hsp90aa1Tg(Tyr)2396BOve/Hsp90aa1Tg(Tyr)2396BOve
Genetic Background: FVB/N-Hsp90aa1Tg(Tyr)2396BOve

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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