ENSG00000183091


Homo sapiens

Features
Gene ID: ENSG00000183091
  
Biological name :NEB
  
Synonyms : NEB / nebulin / P20929
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q23.3
Gene start: 151485336
Gene end: 151734487
  
Corresponding Affymetrix probe sets: 205054_at (Human Genome U133 Plus 2.0 Array)   215368_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000474498
Ensembl peptide - ENSP00000473894
Ensembl peptide - ENSP00000484342
Ensembl peptide - ENSP00000172853
Ensembl peptide - ENSP00000380498
Ensembl peptide - ENSP00000380505
Ensembl peptide - ENSP00000386259
Ensembl peptide - ENSP00000389074
Ensembl peptide - ENSP00000404876
Ensembl peptide - ENSP00000405167
Ensembl peptide - ENSP00000408570
Ensembl peptide - ENSP00000410961
Ensembl peptide - ENSP00000416578
NCBI entrez gene - 4703     See in Manteia.
OMIM - 161650
RefSeq - XM_017004185
RefSeq - XM_006712542
RefSeq - XM_011511225
RefSeq - XM_011511226
RefSeq - XM_011511227
RefSeq - XM_017004177
RefSeq - XM_017004178
RefSeq - XM_017004179
RefSeq - XM_017004180
RefSeq - XM_017004181
RefSeq - XM_017004182
RefSeq - XM_017004183
RefSeq - XM_017004184
RefSeq - NM_001164507
RefSeq - NM_001164508
RefSeq - NM_001271208
RefSeq - NM_004543
RefSeq - XM_005246590
RefSeq - XM_005246591
RefSeq - XM_005246592
RefSeq - XM_005246593
RefSeq - XM_005246594
RefSeq - XM_005246596
RefSeq - XM_005246597
RefSeq - XM_005246598
RefSeq - XM_005246599
RefSeq - XM_005246600
RefSeq - XM_005246601
RefSeq - XM_005246602
RefSeq - XM_005246603
RefSeq - XM_005246604
RefSeq - XM_005246606
RefSeq - XM_005246608
RefSeq - XM_005246610
RefSeq - XM_005246611
RefSeq - XM_005246612
RefSeq - XM_005246613
RefSeq - XM_005246615
RefSeq - XM_005246616
RefSeq - XM_005246617
RefSeq - XM_006712541
RefSeq Peptide - NP_001157980
RefSeq Peptide - NP_001258137
RefSeq Peptide - NP_004534
RefSeq Peptide - NP_001157979
swissprot - H7C2D0
swissprot - H7C2Z5
swissprot - A0A087X1N7
swissprot - H0Y3P5
swissprot - P20929
swissprot - H0Y786
swissprot - H7BZD5
swissprot - H7C2B3
Ensembl - ENSG00000183091
  
Related genetic diseases (OMIM): 256030 - Nemaline myopathy 2, autosomal recessive, 256030
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nebENSDARG00000032630Danio rerio
 NebENSMUSG00000026950Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NRAP / Q86VF7 / nebulin related anchoring proteinENSG000001978938
NEBL / O76041 / nebuletteENSG000000781145
LASP1 / Q14847 / LIM and SH3 protein 1ENSG000000028341


Protein motifs (from Interpro)
Interpro ID Name
 IPR000900  Nebulin repeat
 IPR001452  SH3 domain
 IPR013998  Nebulin-like
 IPR035629  Nebulin, SH3 domain
 IPR036028  SH3-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007517 muscle organ development TAS
 biological_processGO:0007525 somatic muscle development NAS
 biological_processGO:0030049 muscle filament sliding TAS
 biological_processGO:0030832 regulation of actin filament length NAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0015629 actin cytoskeleton TAS
 cellular_componentGO:0030016 myofibril IEA
 cellular_componentGO:0030017 sarcomere IEA
 cellular_componentGO:0030018 Z disc IDA
 cellular_componentGO:0043292 contractile fiber IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008307 structural constituent of muscle TAS


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000478 Abnormality of the eyes "Any abnormality of the `eyes` (FMA:54448), including location, spacing, and intraocular abnormalities." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001283 Bulbar palsy "Bulbar weakness (or bulbar palsy) refers to bilateral impairment of function of the lower cranial nerves IX, X, XI and XII, which occurs due to lower motor neuron lesion either at nuclear or fascicular level in the medulla or from bilateral lesions of the lower cranial nerves outside the brain-stem. Bulbar weakness is often associated with difficulty in chewing, weakness of the facial muscles, dysarthria, palatal weakness and regurgitation of fluids, dysphagia, and dysphonia." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001425 Heterogeneous 
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 HP:0001533 Asthenic habitus "Asthenic habitus refers to a slender build with long limbs, an angular profile, and prominent muscles or bones." [HPO:curators]
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 HP:0001547 Abnormality of the morphology or size of the rib cage 
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0001561 Polyhydramnios 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002058 Myopathic facies "A facial appearance characteristic of myopathic conditions. The face appears expressionless with sunken cheeks, bilateral ptosis, and inability to elevate the corners of the mouth, due to muscle weakness." [HPO:curators]
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002359 Frequent falls 
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 HP:0002515 Waddling gait 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002747 Respiratory insufficiency due to muscle weakness 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0003306 Spinal rigidity 
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 HP:0003307 Hyperlordosis 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003445 EMG shows neuropathic changes 
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 HP:0003458 EMG myopathic abnormalities "The presence of abnormal electromyographic patterns indicative of myopathy, such as small-short polyphasic motor unit potentials." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003722 Neck flexor weakness "Weakness of the muscles involved in neck flexion (sternocleidomastoid, longus capitus, longus colli, and scalenus anterior)." [HPO:curators]
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 HP:0003798 Nemaline bodies "Nemaline rods are abnormal bodies are abnormal that can occur in skeletal muscle fibers. THe rods can be observed on histological analysis of muscle biopsy tissue or upon electron microscopy, where they appear either as extensions of sarcomeric Z-lines, in random array without obvious attachment to Z-lines (often in areas devoid of sarcomeres) or in large clusters localized at the sarcolemma or intermyofibrillar spaces." [HPO:curators, pmid:11333380]
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 HP:0003803 Type 1 muscle fiber predominance "An abnormal predominance of type I muscle fibers (in general, this feature can only be observed on muscle biopsy)." [HPO:curators]
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 HP:0003810 Distal muscle weakness occurs later 
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 HP:0008180 Mildly elevated creatine phosphokinase 
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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