ENSG00000184381


Homo sapiens

Features
Gene ID: ENSG00000184381
  
Biological name :PLA2G6
  
Synonyms : O60733 / phospholipase A2 group VI / PLA2G6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.1
Gene start: 38111495
Gene end: 38205690
  
Corresponding Affymetrix probe sets: 204691_x_at (Human Genome U133 Plus 2.0 Array)   210647_x_at (Human Genome U133 Plus 2.0 Array)   215938_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000413597
Ensembl peptide - ENSP00000413145
Ensembl peptide - ENSP00000472058
Ensembl peptide - ENSP00000473160
Ensembl peptide - ENSP00000333142
Ensembl peptide - ENSP00000335149
Ensembl peptide - ENSP00000386100
Ensembl peptide - ENSP00000392968
Ensembl peptide - ENSP00000393361
Ensembl peptide - ENSP00000393761
Ensembl peptide - ENSP00000395464
Ensembl peptide - ENSP00000401242
Ensembl peptide - ENSP00000404974
Ensembl peptide - ENSP00000407106
Ensembl peptide - ENSP00000407743
Ensembl peptide - ENSP00000408298
Ensembl peptide - ENSP00000412629
NCBI entrez gene - 8398     See in Manteia.
OMIM - 603604
RefSeq - XM_017028986
RefSeq - NM_001199562
RefSeq - NM_001349864
RefSeq - NM_001349865
RefSeq - NM_001349866
RefSeq - NM_003560
RefSeq - XM_005261764
RefSeq - XM_005261765
RefSeq - XM_005261766
RefSeq - XM_006724332
RefSeq - XM_011530422
RefSeq - XM_011530423
RefSeq - XM_011530424
RefSeq - XM_011530425
RefSeq - XM_011530426
RefSeq - XM_017028981
RefSeq - XM_017028982
RefSeq - XM_017028983
RefSeq - XM_017028984
RefSeq - XM_017028985
RefSeq - NM_001004426
RefSeq Peptide - NP_001336795
RefSeq Peptide - NP_003551
RefSeq Peptide - NP_001336793
RefSeq Peptide - NP_001336794
RefSeq Peptide - NP_001004426
RefSeq Peptide - NP_001186491
swissprot - H0Y6W2
swissprot - H0Y7G5
swissprot - H7C3P5
swissprot - E7EX67
swissprot - M0R3D9
swissprot - O60733
swissprot - B0QYE9
swissprot - M0R1Q9
swissprot - F2Z3G2
swissprot - F8WEN3
swissprot - F8WEQ9
swissprot - H0Y4M7
swissprot - H0Y6T3
Ensembl - ENSG00000184381
  
Related genetic diseases (OMIM): 256600 - Infantile neuroaxonal dystrophy 1, 256600
  610217 - Neurodegeneration with brain iron accumulation 2B, 610217
  612953 - Parkinson disease 14, autosomal recessive, 612953
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pla2g6ENSDARG00000060921Danio rerio
 PLA2G6ENSGALG00000012281Gallus gallus
 P97819ENSMUSG00000042632Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PNPLA8 / Q9NP80 / patatin like phospholipase domain containing 8ENSG0000013524116


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR002641  Patatin-like phospholipase domain
 IPR016035  Acyl transferase/acyl hydrolase/lysophospholipase
 IPR020683  Ankyrin repeat-containing domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001934 positive regulation of protein phosphorylation IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006935 chemotaxis IEA
 biological_processGO:0007204 positive regulation of cytosolic calcium ion concentration IEA
 biological_processGO:0007613 memory IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0014832 urinary bladder smooth muscle contraction IEA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0019731 antibacterial humoral response IDA
 biological_processGO:0032049 cardiolipin biosynthetic process IMP
 biological_processGO:0034976 response to endoplasmic reticulum stress IEA
 biological_processGO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus IEA
 biological_processGO:0036151 phosphatidylcholine acyl-chain remodeling TAS
 biological_processGO:0036152 phosphatidylethanolamine acyl-chain remodeling TAS
 biological_processGO:0038096 Fc-gamma receptor signaling pathway involved in phagocytosis TAS
 biological_processGO:0045921 positive regulation of exocytosis IEA
 biological_processGO:0051967 negative regulation of synaptic transmission, glutamatergic IEA
 biological_processGO:0060135 maternal process involved in female pregnancy IEA
 biological_processGO:0090037 positive regulation of protein kinase C signaling IEA
 biological_processGO:0090200 positive regulation of release of cytochrome c from mitochondria IEA
 biological_processGO:0090238 positive regulation of arachidonic acid secretion IEA
 biological_processGO:0097755 positive regulation of blood vessel diameter IEA
 biological_processGO:1901339 regulation of store-operated calcium channel activity IEA
 biological_processGO:2000304 positive regulation of ceramide biosynthetic process IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005815 microtubule organizing center IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004623 phospholipase A2 activity TAS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0016787 hydrolase activity TAS
 molecular_functionGO:0017171 serine hydrolase activity IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0043008 ATP-dependent protein binding IEA
 molecular_functionGO:0047499 calcium-independent phospholipase A2 activity IEA
 molecular_functionGO:0102567 phospholipase A2 activity (consuming 1,2-dipalmitoylphosphatidylcholine) IEA
 molecular_functionGO:0102568 phospholipase A2 activity consuming 1,2-dioleoylphosphatidylethanolamine) IEA


Pathways (from Reactome)
Pathway description
Acyl chain remodelling of PC
Acyl chain remodeling of CL
Acyl chain remodelling of PE
Role of phospholipids in phagocytosis
COPI-independent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000338 Hypomimic face 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000571 Hypometric saccades 
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 HP:0000572 Visual loss 
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 HP:0000605 Supranuclear gaze palsy 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000649 Abnormality of vision evoked potentials 
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 HP:0000658 Eyelid apraxia 
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 HP:0000712 Emotional lability 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
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 HP:0000736 Short attention span "Reduced attention span characterized by distractibility and impulsivity but not necessarily satisfying the diagnostic criteria for attention deficit hyperactivity disorder." [HPO:curators]
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 HP:0000750 Impaired language development 
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 HP:0000751 Personality changes 
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 HP:0000752 Hyperactivity 
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 HP:0000762 Decreased nerve conduction velocities 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001268 Mental deterioration 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001276 Hypertonia 
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001300 Parkinsonism 
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 HP:0001310 Dysmetria 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001884 Talipes calcaneovalgus "Talipes calcaneovalgus is a flexible foot deformity (as opposed to a rigid congenital vertical talus foot deformity) that can either present as a positional or structural foot deformity depending on severity and/or causality. The axis of calcaneovalgus deformity is in the tibiotalar joint, where the foot is positioned in extreme hyperextension. On inspection, the foot has an "up and out" appearance, with the dorsal forefoot practically touching the anterior aspect of the ankle and lower leg." [HPO:curators]
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 HP:0001939 Metabolism abnormality 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002059 Cerebral atrophy 
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 HP:0002062 Abnormality of the pyramidal tracts "An abnormality of the pyramidal system of motor neurons, whose chief element, the corticospinal tract, is the only direct connection between the brain and the spinal cord. In addition to the corticospinal tract, the pyramidal system includes the corticobulbar, corticomesencephalic, and corticopontine tracts." [HPO:curators]
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 HP:0002063 Rigidity 
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002067 Bradykinesia "Bradykinesia literally means slow movement, and is used clinically to denote a slowness in the execution of movement (in contrast to hypokinesia, which is used to refer to slowness in the initiation of movement)." [HPO:curators]
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002075 Dysdiadochokinesis "An inability to perform rapidly alternating movements, such as rhythmically tapping the fingers on the knee, generally related to a cerebellar lesion." [HPO:curators]
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 HP:0002080 Intention tremor "An oscillatory cerebellar ataxia that tends to be absent when the limbs are inactive and during the first part of voluntary movement but worsening as the movement continues and greater precision is required (e.g., in touching a target such as the patient s nose or a physician s finger)." [HPO:curators]
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 HP:0002145 Frontotemporal dementia 
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 HP:0002171 Gliosis 
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 HP:0002172 Postural instability 
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 HP:0002180 Neurodegeneration 
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 HP:0002185 Neurofibrillary tangles 
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 HP:0002283 Diffuse brain atrophy 
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 HP:0002312 Clumsiness 
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 HP:0002317 Unsteady gait 
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 HP:0002376 Developmental regression 
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 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
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 HP:0002529 Neuropathology shows neuronal loss in basal ganglia, brainstem, and cerebellum 
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 HP:0002548 Favorable response to levodopa 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003444 EMG shows chronic denervation 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0003676 Progressive disorder 
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 HP:0003678 Rapidly progressive 
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 HP:0003812 Phenotypic variability 
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 HP:0004326 Cachexia 
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 HP:0004373 Focal dystonia 
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 HP:0006892 Cerebral atrophy, frontotemporal, progressive 
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 HP:0007058 Generalized cerebral hypoplasia/atrophy 
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 HP:0007153 Progressive extrapyramidal movement disorder 
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 HP:0007256 Mild pyramidal signs 
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 HP:0007772 Impaired smooth pursuit in adult patients 
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 HP:0010522 Dyslexia "A learning disorder characterized primarily by difficulties in learning to read and spell. Dyslectic children also exhibit a tendency to read words from right to left and to confuse letters such as b and d whose orientation is important for their identification. Children with dyslexia appear to be impaired in phonemic skills (the ability to associate visual symbols with the sounds they represent)." [HPO:curators]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0011463 Childhood onset "Onset of disease at the age of between 1 and 5 years." [DDD:hfirth]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0011999 Paranoia "A persecutory delusion of supposed hostility of others." [HPO:probinson]
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 HP:0012675 Iron accumulation in brain "An abnormal build up of iron (Fe) in brain tissue." [HPO:probinson]
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 HP:0025262 Stiff hip "A sensation of tightness in the hip joint when attempting to move it, especially after a period of inactivity." []
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 HP:0040081 Abnormal levels of creatine kinase in blood 
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 HP:0100710 Impulsivity 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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