ENSG00000135241


Homo sapiens

Features
Gene ID: ENSG00000135241
  
Biological name :PNPLA8
  
Synonyms : patatin like phospholipase domain containing 8 / PNPLA8 / Q9NP80
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q31.1
Gene start: 108470422
Gene end: 108569666
  
Corresponding Affymetrix probe sets: 223309_x_at (Human Genome U133 Plus 2.0 Array)   223310_x_at (Human Genome U133 Plus 2.0 Array)   223982_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000394988
Ensembl peptide - ENSP00000391872
Ensembl peptide - ENSP00000402274
Ensembl peptide - ENSP00000410804
Ensembl peptide - ENSP00000406779
Ensembl peptide - ENSP00000406033
Ensembl peptide - ENSP00000257694
Ensembl peptide - ENSP00000387789
NCBI entrez gene - 50640     See in Manteia.
OMIM - 612123
RefSeq - XM_017012261
RefSeq - NM_001256007
RefSeq - NM_001256008
RefSeq - NM_001256009
RefSeq - NM_001256010
RefSeq - NM_001256011
RefSeq - NM_015723
RefSeq - XM_005250396
RefSeq - XM_011516274
RefSeq - XM_011516275
RefSeq Peptide - NP_001242936
RefSeq Peptide - NP_001242937
RefSeq Peptide - NP_001242938
RefSeq Peptide - NP_001242939
RefSeq Peptide - NP_001242940
RefSeq Peptide - NP_056538
swissprot - A0A024R746
swissprot - C9JAX4
swissprot - C9J9W9
swissprot - A0A0C4DG51
swissprot - Q9NP80
Ensembl - ENSG00000135241
  
Related genetic diseases (OMIM): 251950 - ?Mitochondrial myopathy with lactic acidosis, 251950
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pnpla8ENSDARG00000078745Danio rerio
 PNPLA8ENSGALG00000009505Gallus gallus
 Pnpla8ENSMUSG00000036257Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O60733 / PLA2G6 / phospholipase A2 group VIENSG0000018438116


Protein motifs (from Interpro)
Interpro ID Name
 IPR002641  Patatin-like phospholipase domain
 IPR016035  Acyl transferase/acyl hydrolase/lysophospholipase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001516 prostaglandin biosynthetic process IDA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IDA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0008219 cell death IDA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0019369 arachidonic acid metabolic process IDA
 biological_processGO:0034638 phosphatidylcholine catabolic process IDA
 biological_processGO:0036151 phosphatidylcholine acyl-chain remodeling TAS
 biological_processGO:0036152 phosphatidylethanolamine acyl-chain remodeling TAS
 biological_processGO:0043651 linoleic acid metabolic process IDA
 biological_processGO:0046338 phosphatidylethanolamine catabolic process IDA
 biological_processGO:0050482 arachidonic acid secretion IDA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005777 peroxisome IDA
 cellular_componentGO:0005778 peroxisomal membrane IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0004622 lysophospholipase activity IEA
 molecular_functionGO:0004623 phospholipase A2 activity TAS
 molecular_functionGO:0005524 ATP binding NAS
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0047499 calcium-independent phospholipase A2 activity IDA


Pathways (from Reactome)
Pathway description
Acyl chain remodelling of PC
Acyl chain remodelling of PE


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001269 Hemiparesis "Relatively mild weakness in the arm, leg, and in some cases the face on one side of the body." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001310 Dysmetria 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002384 Complex partial seizures "A `partial seizure` (HP:0007359) characterized by impairment or loss of consciousness." [HPO:curators]
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 HP:0002572 Episodic vomiting "Paroxysmal, recurrent episodes of vomiting." [HPO:curators]
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003348 Hyperalaninemia 
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003542 Increased serum pyruvate "An abnormal increase in the concentration of pyruvate in the blood. Pyruvate is involved in energy metabolism, forming part of glycolysis and the citric acid cycle." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0003676 Progressive disorder 
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 HP:0003737 Mitochondrial myopathy 
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 HP:0008504 Moderate neural deafness 
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 HP:0008897 Growth retardation, progressive 
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 HP:0040083 Toe walking 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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