ENSG00000186448


Homo sapiens

Features
Gene ID: ENSG00000186448
  
Biological name :ZNF197
  
Synonyms : O14709 / zinc finger protein 197 / ZNF197
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p21.31
Gene start: 44584888
Gene end: 44648471
  
Corresponding Affymetrix probe sets: 205855_at (Human Genome U133 Plus 2.0 Array)   233070_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000379370
Ensembl peptide - ENSP00000373251
Ensembl peptide - ENSP00000394713
Ensembl peptide - ENSP00000334616
Ensembl peptide - ENSP00000345809
Ensembl peptide - ENSP00000373250
NCBI entrez gene - 110354863     See in Manteia.
NCBI entrez gene - 10168     See in Manteia.
RefSeq - XM_017005495
RefSeq - NM_001024855
RefSeq - NM_001323294
RefSeq - NM_001351734
RefSeq - NM_001351735
RefSeq - NM_006991
RefSeq - XM_005264783
RefSeq Peptide - NP_008922
RefSeq Peptide - NP_001310223
RefSeq Peptide - NP_001020026
RefSeq Peptide - NP_001338661
RefSeq Peptide - NP_001338662
RefSeq Peptide - NP_001310222
RefSeq Peptide - NP_001338663
RefSeq Peptide - NP_001338664
swissprot - C9JQH5
swissprot - F8WEU5
swissprot - O14709
Ensembl - ENSG00000186448
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkeyp-82h4.3ENSDARG00000102062Danio rerio
 znf1021ENSDARG00000114646Danio rerio
 znf1026ENSDARG00000114894Danio rerio
 znf976ENSDARG00000113626Danio rerio
 znf985ENSDARG00000114783Danio rerio
 znf985ENSDARG00000109604Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A8MQ14 / ZNF850 / zinc finger protein 850ENSG0000026704138
Q14587 / ZNF268 / zinc finger protein 268ENSG0000009061237
Q6P3V2 / ZNF585A / zinc finger protein 585AENSG0000019696735
Q52M93 / ZNF585B / zinc finger protein 585BENSG0000024568035
Q6ZN19 / ZNF841 / zinc finger protein 841ENSG0000019760834
Q5TYW1 / ZNF658 / zinc finger protein 658ENSG0000027434934
Q8TF20 / ZNF721 / zinc finger protein 721ENSG0000018290333
Q96IR2 / ZNF845 / zinc finger protein 845ENSG0000021379933
A6NN14 / ZNF729 / zinc finger protein 729ENSG0000019635033
Q96JF6 / ZNF594 / zinc finger protein 594ENSG0000018062633
Q96SE7 / ZNF347 / zinc finger protein 347ENSG0000019793733
Q9HCG1 / ZNF160 / zinc finger protein 160ENSG0000017094933
ZFP62 / Q8NB50 / ZFP62 zinc finger proteinENSG0000019667032
Q9P2J8 / ZNF624 / zinc finger protein 624ENSG0000019756632
ZNF99 / A8MXY4 / zinc finger protein 99ENSG0000021397328
Q9H0M5 / ZNF700 / zinc finger protein 700ENSG0000019675727


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr