ENSG00000186976


Homo sapiens

Features
Gene ID: ENSG00000186976
  
Biological name :EFCAB6
  
Synonyms : EFCAB6 / EF-hand calcium binding domain 6 / Q5THR3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.31
Gene start: 43528744
Gene end: 43812337
  
Corresponding Affymetrix probe sets: 1562815_at (Human Genome U133 Plus 2.0 Array)   220271_x_at (Human Genome U133 Plus 2.0 Array)   233345_at (Human Genome U133 Plus 2.0 Array)   233600_at (Human Genome U133 Plus 2.0 Array)   233839_at (Human Genome U133 Plus 2.0 Array)   234732_s_at (Human Genome U133 Plus 2.0 Array)   234853_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000379533
Ensembl peptide - ENSP00000262726
Ensembl peptide - ENSP00000348391
NCBI entrez gene - 64800     See in Manteia.
RefSeq - XM_017028912
RefSeq - NM_022785
RefSeq - NM_198856
RefSeq - XM_011530329
RefSeq - XM_011530330
RefSeq - XM_017028910
RefSeq - XM_017028911
RefSeq - XM_005261704
RefSeq - XM_005261705
RefSeq - XM_011530316
RefSeq - XM_011530317
RefSeq - XM_011530318
RefSeq - XM_011530319
RefSeq - XM_011530320
RefSeq - XM_011530321
RefSeq - XM_011530322
RefSeq - XM_011530323
RefSeq - XM_011530325
RefSeq - XM_011530326
RefSeq - XM_011530327
RefSeq - XM_011530328
RefSeq Peptide - NP_073622
RefSeq Peptide - NP_942153
swissprot - Q5THR3
swissprot - B0QYI5
Ensembl - ENSG00000186976
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-256e7.5ENSDARG00000042937Danio rerio
 ENSGALG00000014188Gallus gallus
 Efcab6ENSMUSG00000022441Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR015070  DJBP, EF-hand domain
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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