ENSMUSG00000022441


Mus musculus

Features
Gene ID: ENSMUSG00000022441
  
Biological name :Efcab6
  
Synonyms : Efcab6 / EF-hand calcium-binding domain-containing protein 6 / Q6P1E8
  
Possible biological names infered from orthology : EF-hand calcium binding domain 6 / Q5THR3
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E2
Gene start: 83866712
Gene end: 84065379
  
Corresponding Affymetrix probe sets: 10431080 (MoGene1.0st)   1453766_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114909
Ensembl peptide - ENSMUSP00000128002
NCBI entrez gene - 77627     See in Manteia.
MGI - MGI:1924877
RefSeq - XM_017316794
RefSeq - NM_029946
RefSeq - XM_017316791
RefSeq - XM_017316792
RefSeq - XM_017316793
RefSeq - XM_006521531
RefSeq - XM_006521533
RefSeq - XM_017316790
RefSeq Peptide - NP_084222
swissprot - Q6P1E8
swissprot - F6RST1
Ensembl - ENSMUSG00000022441
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-256e7.5ENSDARG00000042937Danio rerio
 ENSGALG00000014188Gallus gallus
 EFCAB6ENSG00000186976Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR015070  DJBP, EF-hand domain
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr