ENSG00000188039


Homo sapiens

Features
Gene ID: ENSG00000188039
  
Biological name :NWD1
  
Synonyms : NACHT and WD repeat domain containing 1 / NWD1 / Q149M9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.11
Gene start: 16719976
Gene end: 16817963
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000447548
Ensembl peptide - ENSP00000447224
Ensembl peptide - ENSP00000496092
Ensembl peptide - ENSP00000369136
Ensembl peptide - ENSP00000400248
Ensembl peptide - ENSP00000428224
Ensembl peptide - ENSP00000428579
NCBI entrez gene - 284434     See in Manteia.
OMIM - 616250
RefSeq - XM_017026669
RefSeq - XM_011527929
RefSeq - XM_011527930
RefSeq - XM_011527931
RefSeq - XM_011527934
RefSeq - XM_011527935
RefSeq - NM_001007525
RefSeq - NM_001290355
RefSeq Peptide - NP_001007526
RefSeq Peptide - NP_001277284
swissprot - F8W0U9
swissprot - Q149M9
swissprot - E5RJJ1
Ensembl - ENSG00000188039
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nwd1ENSDARG00000076110Danio rerio
 Nwd1ENSMUSG00000048148Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NWD2 / Q9ULI1 / NACHT and WD repeat domain containing 2ENSG0000017414521


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011044  Quinoprotein amine dehydrogenase, beta chain-like
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008380 RNA splicing IBA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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