ENSMUSG00000048148


Mus musculus

Features
Gene ID: ENSMUSG00000048148
  
Biological name :Nwd1
  
Synonyms : A6H603 / NACHT domain- and WD repeat-containing protein 1 / Nwd1
  
Possible biological names infered from orthology : NACHT and WD repeat domain containing 1 / Q149M9
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: B3.3
Gene start: 72646711
Gene end: 72717876
  
Corresponding Affymetrix probe sets: 1439894_at (Mouse Genome 430 2.0 Array)   1458353_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000154488
Ensembl peptide - ENSMUSP00000124446
Ensembl peptide - ENSMUSP00000124804
Ensembl peptide - ENSMUSP00000125470
Ensembl peptide - ENSMUSP00000091135
NCBI entrez gene - 319555     See in Manteia.
MGI - MGI:2442268
RefSeq - XM_006531093
RefSeq - XM_006531089
RefSeq - XM_006531090
RefSeq - XM_006531091
RefSeq - XM_006531092
RefSeq - NM_176940
RefSeq - XM_006531086
RefSeq - XM_006531087
RefSeq - XM_006531088
RefSeq Peptide - NP_795914
swissprot - E0CY71
swissprot - E0CX99
swissprot - A6H603
Ensembl - ENSMUSG00000048148
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nwd1ENSDARG00000076110Danio rerio
 NWD1ENSG00000188039Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Nwd2 / Q6P5U7 / NACHT and WD repeat domain-containing protein 2 / Q9ULI1* / NACHT and WD repeat domain containing 2*ENSMUSG0000009006121


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain
 IPR025139  Domain of unknown function DUF4062
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008380 RNA splicing IBA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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