ENSG00000188917


Homo sapiens

Features
Gene ID: ENSG00000188917
  
Biological name :TRMT2B
  
Synonyms : Q96GJ1 / TRMT2B / tRNA methyltransferase 2 homolog B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q22.1
Gene start: 101009346
Gene end: 101052116
  
Corresponding Affymetrix probe sets: 1554279_a_at (Human Genome U133 Plus 2.0 Array)   205238_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000438134
Ensembl peptide - ENSP00000362026
Ensembl peptide - ENSP00000362027
Ensembl peptide - ENSP00000362030
NCBI entrez gene - 79979     See in Manteia.
RefSeq - XM_017029875
RefSeq - NM_001167970
RefSeq - NM_001167971
RefSeq - NM_001167972
RefSeq - NM_024917
RefSeq - XM_017029869
RefSeq - XM_017029870
RefSeq - XM_017029871
RefSeq - XM_017029872
RefSeq - XM_017029873
RefSeq - XM_017029874
RefSeq - XM_005262195
RefSeq - XM_005262196
RefSeq - XM_005262201
RefSeq - XM_006724705
RefSeq - XM_011531042
RefSeq - XM_011531044
RefSeq - XM_017029858
RefSeq - XM_017029859
RefSeq - XM_017029860
RefSeq - XM_017029861
RefSeq - XM_017029862
RefSeq - XM_017029863
RefSeq - XM_017029864
RefSeq - XM_017029865
RefSeq - XM_017029866
RefSeq - XM_017029867
RefSeq - XM_017029868
RefSeq Peptide - NP_001161442
RefSeq Peptide - NP_001161443
RefSeq Peptide - NP_001161444
RefSeq Peptide - NP_079193
swissprot - Q96GJ1
swissprot - A0A024RCF5
Ensembl - ENSG00000188917
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A4QP75ENSDARG00000033967Danio rerio
 TRMT2BENSGALG00000034383Gallus gallus
 Q8BQJ6ENSMUSG00000067369Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8IZ69 / TRMT2A / tRNA methyltransferase 2 homolog AENSG0000009989934


Protein motifs (from Interpro)
Interpro ID Name
 IPR010280  (Uracil-5)-methyltransferase family
 IPR025823  tRNA (uracil-5-)-methyltransferase, metazoa
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008173 RNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030697 S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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