ENSMUSG00000067369


Mus musculus

Features
Gene ID: ENSMUSG00000067369
  
Biological name :Trmt2b
  
Synonyms : Q8BQJ6 / TRM2 tRNA methyltransferase 2B / Trmt2b
  
Possible biological names infered from orthology : Q96GJ1 / tRNA methyltransferase 2 homolog B
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: E3
Gene start: 134222339
Gene end: 134276984
  
Corresponding Affymetrix probe sets: 10606658 (MoGene1.0st)   1433672_at (Mouse Genome 430 2.0 Array)   1459798_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000084819
Ensembl peptide - ENSMUSP00000084820
Ensembl peptide - ENSMUSP00000108878
Ensembl peptide - ENSMUSP00000138612
NCBI entrez gene - 215201     See in Manteia.
MGI - MGI:2442530
RefSeq - XM_011247734
RefSeq - NM_001167994
RefSeq - NM_001167995
RefSeq - NM_172540
RefSeq - XM_006528514
RefSeq Peptide - NP_766128
RefSeq Peptide - NP_001161466
RefSeq Peptide - NP_001161467
swissprot - Q8BQJ6
swissprot - Q8C8J3
swissprot - S4R2E5
Ensembl - ENSMUSG00000067369
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A4QP75ENSDARG00000033967Danio rerio
 TRMT2BENSGALG00000034383Gallus gallus
 Q96GJ1ENSG00000188917Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BNV1 / Trmt2a / TRM2 tRNA methyltransferase 2A / Q8IZ69* / tRNA methyltransferase 2 homolog A*ENSMUSG0000002272135


Protein motifs (from Interpro)
Interpro ID Name
 IPR010280  (Uracil-5)-methyltransferase family
 IPR025714  Methyltransferase domain
 IPR025823  tRNA (uracil-5-)-methyltransferase, metazoa
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005739 mitochondrion IDA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008173 RNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030697 S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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