ENSG00000189050


Homo sapiens

Features
Gene ID: ENSG00000189050
  
Biological name :RNFT1
  
Synonyms : Q5M7Z0 / ring finger protein, transmembrane 1 / RNFT1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q23.1
Gene start: 59952240
Gene end: 59964761
  
Corresponding Affymetrix probe sets: 221194_s_at (Human Genome U133 Plus 2.0 Array)   221195_at (Human Genome U133 Plus 2.0 Array)   227268_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000436533
Ensembl peptide - ENSP00000464987
Ensembl peptide - ENSP00000436909
Ensembl peptide - ENSP00000304670
Ensembl peptide - ENSP00000436144
NCBI entrez gene - 51136     See in Manteia.
OMIM - 615172
RefSeq - NM_016125
RefSeq Peptide - NP_057209
swissprot - Q5M7Z0
swissprot - K7EJ18
swissprot - H0YEZ8
swissprot - E9PI44
Ensembl - ENSG00000189050
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnft1ENSDARG00000015917Danio rerio
 RNFT1ENSGALG00000005205Gallus gallus
 Rnft1ENSMUSG00000020521Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNFT2 / Q96EX2 / ring finger protein, transmembrane 2ENSG0000013511937


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr