ENSG00000196652


Homo sapiens

Features
Gene ID: ENSG00000196652
  
Biological name :ZKSCAN5
  
Synonyms : Q9Y2L8 / zinc finger with KRAB and SCAN domains 5 / ZKSCAN5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q22.1
Gene start: 99504651
Gene end: 99534700
  
Corresponding Affymetrix probe sets: 203730_s_at (Human Genome U133 Plus 2.0 Array)   203731_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000322872
Ensembl peptide - ENSP00000377725
Ensembl peptide - ENSP00000392104
Ensembl peptide - ENSP00000405716
NCBI entrez gene - 23660     See in Manteia.
OMIM - 611272
RefSeq - XM_017011927
RefSeq - NM_001318082
RefSeq - NM_001318083
RefSeq - NM_001318084
RefSeq - NM_014569
RefSeq - NM_145102
RefSeq - XM_017011920
RefSeq - XM_017011921
RefSeq - XM_017011922
RefSeq - XM_017011923
RefSeq - XM_017011924
RefSeq - XM_017011925
RefSeq - XM_017011926
RefSeq - XM_011515999
RefSeq - XM_017011918
RefSeq - XM_017011919
RefSeq Peptide - NP_001305011
RefSeq Peptide - NP_001305012
RefSeq Peptide - NP_001305013
RefSeq Peptide - NP_055384
RefSeq Peptide - NP_659570
swissprot - Q9Y2L8
swissprot - F8WBD4
Ensembl - ENSG00000196652
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9Z1D8ENSMUSG00000055991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N0Y2 / ZNF444 / zinc finger protein 444ENSG0000016768515


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding NAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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