ENSMUSG00000055991


Mus musculus

Features
Gene ID: ENSMUSG00000055991
  
Biological name :Zkscan5
  
Synonyms : Q9Z1D8 / zinc finger with KRAB and SCAN domains 5 / Zkscan5
  
Possible biological names infered from orthology : Q9Y2L8
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: G2
Gene start: 145204562
Gene end: 145221750
  
Corresponding Affymetrix probe sets: 10527465 (MoGene1.0st)   1424892_at (Mouse Genome 430 2.0 Array)   1430562_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000082814
Ensembl peptide - ENSMUSP00000124544
Ensembl peptide - ENSMUSP00000124838
Ensembl peptide - ENSMUSP00000031601
Ensembl peptide - ENSMUSP00000124171
NCBI entrez gene - 22757     See in Manteia.
MGI - MGI:107533
RefSeq - XM_017320817
RefSeq - NM_001167944
RefSeq - NM_001359188
RefSeq - NM_001359189
RefSeq - NM_001359190
RefSeq - NM_016683
RefSeq - XM_006504820
RefSeq - XM_006504823
RefSeq - XM_017320816
RefSeq Peptide - NP_001161416
RefSeq Peptide - NP_001346118
RefSeq Peptide - NP_001346119
RefSeq Peptide - NP_057892
RefSeq Peptide - NP_001346117
swissprot - E0CX87
swissprot - Q6PAK4
swissprot - F6TRS7
swissprot - F6SSC9
swissprot - Q9Z1D8
Ensembl - ENSMUSG00000055991
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9Y2L8ENSG00000196652Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zfp444 / zinc finger protein 444 / Q8N0Y2* / ZNF444*ENSMUSG0000004487616


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr