ENSG00000197024


Homo sapiens

Features
Gene ID: ENSG00000197024
  
Biological name :ZNF398
  
Synonyms : Q8TD17 / zinc finger protein 398 / ZNF398
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q36.1
Gene start: 149126416
Gene end: 149182802
  
Corresponding Affymetrix probe sets: 1555015_a_at (Human Genome U133 Plus 2.0 Array)   226202_at (Human Genome U133 Plus 2.0 Array)   228145_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000419391
Ensembl peptide - ENSP00000420418
Ensembl peptide - ENSP00000389972
Ensembl peptide - ENSP00000418564
NCBI entrez gene - 57541     See in Manteia.
RefSeq - XM_011516441
RefSeq - NM_020781
RefSeq - NM_170686
RefSeq - XM_011516439
RefSeq - XM_011516440
RefSeq Peptide - NP_733787
RefSeq Peptide - NP_065832
swissprot - A0A090N8F2
swissprot - Q8TD17
swissprot - A0A090N7S8
Ensembl - ENSG00000197024
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Zfp398ENSMUSG00000062519Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UDV7 / ZNF282 / zinc finger protein 282ENSG0000017026540
Q6NUN9 / ZNF746 / zinc finger protein 746ENSG0000018122034
Q9ULD5 / ZNF777 / zinc finger protein 777ENSG0000019645334
Q6ZMS7 / ZNF783 / zinc finger family member 783ENSG0000020494634
Q9UDV6 / ZNF212 / zinc finger protein 212ENSG0000017026029


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR022137  Protein of unknown function DUF3669, zinc finger protein
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated NAS
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated NAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus NAS
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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