ENSG00000197506


Homo sapiens

Features
Gene ID: ENSG00000197506
  
Biological name :SLC28A3
  
Synonyms : Q9HAS3 / SLC28A3 / solute carrier family 28 member 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q21.33
Gene start: 84275457
Gene end: 84340683
  
Corresponding Affymetrix probe sets: 220475_at (Human Genome U133 Plus 2.0 Array)   232277_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000365413
NCBI entrez gene - 64078     See in Manteia.
OMIM - 608269
RefSeq - XM_011518908
RefSeq - NM_001199633
RefSeq - NM_022127
RefSeq - XM_011518905
RefSeq - XM_011518906
RefSeq - XM_011518907
RefSeq Peptide - NP_071410
RefSeq Peptide - NP_001186562
swissprot - Q9HAS3
Ensembl - ENSG00000197506
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC28A3ENSGALG00000012593Gallus gallus
 Q9ERH8ENSMUSG00000021553Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O00337 / SLC28A1 / solute carrier family 28 member 1ENSG0000015622240
O43868 / SLC28A2 / solute carrier family 28 member 2ENSG0000013786039


Protein motifs (from Interpro)
Interpro ID Name
 IPR002668  Concentrative nucleoside transporter N-terminal domain
 IPR008276  Concentrative nucleoside transporter
 IPR011642  Nucleoside transporter/FeoB GTPase, Gate domain
 IPR011657  Concentrative nucleoside transporter C-terminal domain
 IPR018270  Concentrative nucleoside transporter, metazoan/bacterial
 IPR030211  Concentrative nucleoside transporter CNT3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015855 pyrimidine nucleobase transport IEA
 biological_processGO:0015860 purine nucleoside transmembrane transport IEA
 biological_processGO:0015864 pyrimidine nucleoside transport IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0072531 pyrimidine-containing compound transmembrane transport IEA
 biological_processGO:1901642 nucleoside transmembrane transport IEA
 biological_processGO:1904823 purine nucleobase transmembrane transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005337 nucleoside transmembrane transporter activity IEA
 molecular_functionGO:0005415 nucleoside:sodium symporter activity TAS
 molecular_functionGO:0015389 pyrimidine- and adenine-specific:sodium symporter activity IEA
 molecular_functionGO:0015390 purine-specific nucleoside:sodium symporter activity IEA


Pathways (from Reactome)
Pathway description
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr