ENSMUSG00000021553


Mus musculus

Features
Gene ID: ENSMUSG00000021553
  
Biological name :Slc28a3
  
Synonyms : Q9ERH8 / Slc28a3 / Solute carrier family 28 member 3
  
Possible biological names infered from orthology : Q9HAS3
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: B1
Gene start: 58545399
Gene end: 58610877
  
Corresponding Affymetrix probe sets: 10409713 (MoGene1.0st)   1419570_at (Mouse Genome 430 2.0 Array)   1419571_at (Mouse Genome 430 2.0 Array)   1445528_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000122865
Ensembl peptide - ENSMUSP00000123681
Ensembl peptide - ENSMUSP00000022036
NCBI entrez gene - 114304     See in Manteia.
MGI - MGI:2137361
RefSeq - NM_022317
RefSeq Peptide - NP_071712
swissprot - Q9ERH8
swissprot - D6RFS6
swissprot - F6VNY5
Ensembl - ENSMUSG00000021553
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC28A3ENSGALG00000012593Gallus gallus
 Q9HAS3ENSG00000197506Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Slc28a1 / solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 / O00337* / solute carrier family 28 member 1*ENSMUSG0000002572641
O88627 / Slc28a2 / Mus musculus solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 (Slc28a2), transcript variant 2, mRNA. / O43868* / solute carrier family 28 member 2*ENSMUSG0000002721939
Gm14085 / O43868* / SLC28A2* / solute carrier family 28 member 2*ENSMUSG0000007907139


Protein motifs (from Interpro)
Interpro ID Name
 IPR002668  Concentrative nucleoside transporter N-terminal domain
 IPR008276  Concentrative nucleoside transporter
 IPR011642  Nucleoside transporter/FeoB GTPase, Gate domain
 IPR011657  Concentrative nucleoside transporter C-terminal domain
 IPR018270  Concentrative nucleoside transporter, metazoan/bacterial
 IPR030211  Concentrative nucleoside transporter CNT3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015855 pyrimidine nucleobase transport IEA
 biological_processGO:0015860 purine nucleoside transmembrane transport IDA
 biological_processGO:0015864 pyrimidine nucleoside transport IDA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0072531 pyrimidine-containing compound transmembrane transport IEA
 biological_processGO:1901642 nucleoside transmembrane transport IEA
 biological_processGO:1904823 purine nucleobase transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005337 nucleoside transmembrane transporter activity IEA
 molecular_functionGO:0015389 pyrimidine- and adenine-specific:sodium symporter activity IDA
 molecular_functionGO:0015390 purine-specific nucleoside:sodium symporter activity IDA


Pathways (from Reactome)
Pathway description
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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