ENSG00000197782


Homo sapiens

Features
Gene ID: ENSG00000197782
  
Biological name :ZNF780A
  
Synonyms : O75290 / zinc finger protein 780A / ZNF780A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.2
Gene start: 40069152
Gene end: 40090938
  
Corresponding Affymetrix probe sets: 215570_s_at (Human Genome U133 Plus 2.0 Array)   238907_at (Human Genome U133 Plus 2.0 Array)   239441_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000469786
Ensembl peptide - ENSP00000469905
Ensembl peptide - ENSP00000472779
Ensembl peptide - ENSP00000472189
Ensembl peptide - ENSP00000470265
Ensembl peptide - ENSP00000341507
Ensembl peptide - ENSP00000387705
Ensembl peptide - ENSP00000400997
Ensembl peptide - ENSP00000416294
Ensembl peptide - ENSP00000469407
Ensembl peptide - ENSP00000469694
NCBI entrez gene - 284323     See in Manteia.
RefSeq - XM_017026619
RefSeq - XM_006723150
RefSeq - XM_011526771
RefSeq - XM_011526772
RefSeq - XM_017026611
RefSeq - XM_017026612
RefSeq - XM_017026613
RefSeq - XM_017026614
RefSeq - XM_017026615
RefSeq - XM_017026616
RefSeq - XM_017026617
RefSeq - XM_017026618
RefSeq - NM_001010880
RefSeq - NM_001142577
RefSeq - NM_001142578
RefSeq - NM_001142579
RefSeq - XM_005258773
RefSeq Peptide - NP_001136049
RefSeq Peptide - NP_001136050
RefSeq Peptide - NP_001136051
RefSeq Peptide - NP_001010880
swissprot - M0QYL2
swissprot - A0A075B791
swissprot - A0A0C4DG08
swissprot - O75290
swissprot - A0A075B7B0
swissprot - A0A075B796
swissprot - M0QXV4
Ensembl - ENSG00000197782
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CT027801.1ENSDARG00000096005Danio rerio
 Zfp420ENSMUSG00000058402Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86YE8 / ZNF573 / zinc finger protein 573ENSG0000018914445
Q99676 / ZNF184 / zinc finger protein 184ENSG0000009665442
Q6ECI4 / ZNF470 / zinc finger protein 470ENSG0000019701642
Q5MCW4 / ZNF569 / zinc finger protein 569ENSG0000019643741
P52742 / ZNF135 / zinc finger protein 135ENSG0000017629338
Q9H7R5 / ZNF665 / zinc finger protein 665ENSG0000019749738
ZNF23 / P17027 / zinc finger protein 23ENSG0000016737735
B4DU55 / ZNF879 / zinc finger protein 879ENSG0000023428434
Q76KX8 / ZNF534 / zinc finger protein 534ENSG0000019863334
ZNF16 / P17020 / zinc finger protein 16ENSG0000017063134
O75820 / ZNF189 / zinc finger protein 189ENSG0000013687033
Q9HBT7 / ZNF287 / zinc finger protein 287ENSG0000014104033
Q9P0L1 / ZKSCAN7 / zinc finger with KRAB and SCAN domains 7ENSG0000019634530
Q5SXM1 / ZNF678 / zinc finger protein 678ENSG0000018145029
ZNF83 / P51522 / zinc finger protein 83ENSG0000016776628
ZFP3 / Q96NJ6 / ZFP3 zinc finger proteinENSG0000018078727
ZNF71 / Q9NQZ8 / zinc finger protein 71ENSG0000019795126
ZFP2 / Q6ZN57 / ZFP2 zinc finger proteinENSG0000019893925
Q6ZMS4 / ZNF852 / zinc finger protein 852ENSG0000017891724
Q8TBZ5 / ZNF502 / zinc finger protein 502ENSG0000019665323


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr