ENSG00000198171


Homo sapiens

Features
Gene ID: ENSG00000198171
  
Biological name :DDRGK1
  
Synonyms : DDRGK1 / DDRGK domain containing 1 / Q96HY6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: p13
Gene start: 3190350
Gene end: 3204685
  
Corresponding Affymetrix probe sets: 218159_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000346483
Ensembl peptide - ENSP00000369548
NCBI entrez gene - 65992     See in Manteia.
OMIM - 616177
RefSeq - NM_023935
RefSeq Peptide - NP_076424
swissprot - A0A0A0MRX2
swissprot - Q96HY6
Ensembl - ENSG00000198171
  
Related genetic diseases (OMIM): 602557 - Spondyloepimetaphyseal dysplasia, Shohat type, 602557
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddrgk1ENSDARG00000037172Danio rerio
 DDRGK1ENSGALG00000016003Gallus gallus
 Ddrgk1ENSMUSG00000068290Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019153  DDRGK domain containing protein
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008284 positive regulation of cell proliferation IMP
 biological_processGO:0010628 positive regulation of gene expression IMP
 biological_processGO:0010629 negative regulation of gene expression IMP
 biological_processGO:0030335 positive regulation of cell migration IMP
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IMP
 biological_processGO:0033146 regulation of intracellular estrogen receptor signaling pathway IDA
 biological_processGO:0034976 response to endoplasmic reticulum stress IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IMP
 biological_processGO:1901800 positive regulation of proteasomal protein catabolic process IMP
 biological_processGO:1902808 positive regulation of cell cycle G1/S phase transition IC
 biological_processGO:1903721 positive regulation of I-kappaB phosphorylation IMP
 biological_processGO:1905050 positive regulation of metallopeptidase activity IMP
 biological_processGO:1905552 positive regulation of protein localization to endoplasmic reticulum IEA
 biological_processGO:1905636 positive regulation of RNA polymerase II regulatory region sequence-specific DNA binding IMP
 biological_processGO:1990592 protein K69-linked ufmylation IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IDA
 molecular_functionGO:0001103 RNA polymerase II repressing transcription factor binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0044389 ubiquitin-like protein ligase binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000233 Thin vermillion border 
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000470 Short neck 
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 HP:0000772 Abnormality of the ribs 
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 HP:0000773 Short ribs 
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 HP:0000926 Platyspondyly 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001388 Joint laxity 
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 HP:0001591 Bell-shaped chest 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002645 Wormian bones 
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 HP:0002651 Spondyloepimetaphyseal dysplasia 
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 HP:0002663 Late ossifying epiphyses 
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 HP:0002812 Coxa vara 
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 HP:0002938 Lumbar hyperlordosis 
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 HP:0002970 Genu varum 
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 HP:0002983 Micromelia 
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 HP:0003015 Metaphyseal flaring "The presence of splayed (i.e.,flared) metaphyseal segments of the long bones." [HPO:curators]
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 HP:0003016 Metaphyseal widening "Abnormal widening of the metaphyseal regions of long bones." [HPO:curators]
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 HP:0003025 Irregular metaphyses 
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 HP:0003097 Short femur "An abnormal shortening of the thigh bones." [HPO:curators]
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 HP:0003099 Fibular overgrowth 
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 HP:0003180 Flat acetabular roofs 
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0003375 Narrow greater sacrosciatic notches "A narrowing of the sacrosciatic notch, i.e., the deep indentation in the posterior border of the hip bone at the point of union of the ilium and ischium." [HPO:curators]
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 HP:0003498 Short stature, disproportionate 
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0004298 Abnormality of the abdominal wall "The presence of any abnormality affecting the abdominal wall." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005692 Joint hyperflexibility 
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0008417 Vertebral hypoplasia 
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 HP:0008450 Narrow vertebral interpedicular distance "A narrowing of the distance between vertebral pedicles, which are the two short, thick processes, which project backward, one on either side, from the upper part of the verterbral body, at the junction of its posterior and lateral surfaces." [HPO:curators]
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 HP:0008463 Central vertebral hypoplasia 
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 HP:0009826 Hypoplasia involving bones of the extremities 
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 HP:0010306 Short thorax "Reduced inferior to superior extent of the thorax." [HPO:curators]
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 HP:0010656 Abnormality of the mineralisation or ossification of the epiphyses "Abnormal mineralisation/calicfication and ossification affecting the epiphyses." [HPO:curators]
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 HP:0100864 Hypoplasia of the femoral neck 
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 HP:0100866 Short iliac bones 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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