ENSG00000203877


Homo sapiens

Features
Gene ID: ENSG00000203877
  
Biological name :RIPPLY2
  
Synonyms : Q5TAB7 / RIPPLY2 / ripply transcriptional repressor 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q14.2
Gene start: 83853266
Gene end: 83857515
  
Corresponding Affymetrix probe sets: 236771_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358703
Ensembl peptide - ENSP00000358701
NCBI entrez gene - 134701     See in Manteia.
OMIM - 609891
RefSeq - NM_001009994
RefSeq Peptide - NP_001009994
swissprot - Q5TAB7
Ensembl - ENSG00000203877
  
Related genetic diseases (OMIM): 616566 - ?Spondylocostal dysostosis 6, 616566
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q2WG79ENSDARG00000070535Danio rerio
 RIPPLY2ENSGALG00000015845Gallus gallus
 Q2WG76ENSMUSG00000047897Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q0D2K3 / RIPPLY1 / ripply transcriptional repressor 1ENSG0000014722333


Protein motifs (from Interpro)
Interpro ID Name
 IPR028127  Ripply family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0001503 ossification IEA
 biological_processGO:0001756 somitogenesis ISS
 biological_processGO:0007219 Notch signaling pathway IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0009798 axis specification IEA
 biological_processGO:0009880 embryonic pattern specification IBA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0032525 somite rostral/caudal axis specification ISS
 biological_processGO:0036342 post-anal tail morphogenesis IEA
 biological_processGO:0060349 bone morphogenesis IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000008 Abnormality of female internal genitalia 
Show

 HP:0000023 Inguinal hernia 
Show

 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
Show

 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
Show

 HP:0000069 Abnormality of the ureters "An abnormality of the ureters, the ductal organs that transport urine from the kidneys to the urinary bladder." [HPO:curators]
Show

 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
Show

 HP:0000269 Prominent occiput 
Show

 HP:0000337 Broad forehead "Abnormally large side-to-side distance of the forehead." [HPO:curators]
Show

 HP:0000343 Long philtrum 
Show

 HP:0000368 Low-set, posteriorly rotated ears 
Show

 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
Show

 HP:0000470 Short neck 
Show

 HP:0000776 Diaphragmatic hernia "Diaphragmatic hernia is the result of a developmental defect causing an abnormal opening in the diaphragm, through which abdominal organs (stomach, spleen, liver, and intestines) can protrude into the thoracic cavity. This usually causes respiratory distress in the newborn period." [HPO:curators]
Show

 HP:0000902 Rib fusion 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001511 Intrauterine growth retardation 
Show

 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
Show

 HP:0002093 Respiratory insufficiency 
Show

 HP:0002435 Meningocele 
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

 HP:0002808 Kyphosis 
Show

 HP:0002947 Cervical kyphosis 
Show

 HP:0003298 Spina bifida occulta "The closed form of spina bifida." [HPO:curators]
Show

 HP:0003312 Abnormal form of the vertebral bodies 
Show

 HP:0003416 Spinal canal stenosis 
Show

 HP:0003422 Vertebral segmentation defects 
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0005108 Abnormality of the intervertebral disks 
Show

 HP:0005280 Depressed nasal root and bridge 
Show

 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
Show

 HP:0006655 Rib segmentation abnormalities 
Show

 HP:0010306 Short thorax "Reduced inferior to superior extent of the thorax." [HPO:curators]
Show

 HP:0010772 Anomalous pulmonary venous return "A developmental defect characterized by abnormal connection of or more pulmonary veins to the superior or inferior vena cava, the right atrium, or the coronary sinus, resulting in a left-to-right shunt of oxygenated blood." [HPO:probinson]
Show

 HP:0010978 Abnormality of immune system physiology "A functional abnormality of the `immune system` (FMA:9825)." [HPO:probinson, MP:0001790]
Show

 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
Show

 HP:0100589 Urogenital fistula "The presence of a `fistula` (MPATH:70) affecting the `genitourinary system` (FMA:280610)." [HPO:probinson]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr