ENSG00000204449


Homo sapiens

Features
Gene ID: ENSG00000204449
  
Biological name :TRIM49C
  
Synonyms : P0CI26 / TRIM49C / tripartite motif containing 49C
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q14.3
Gene start: 90031106
Gene end: 90042025
  
Corresponding Affymetrix probe sets: 221154_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000388299
NCBI entrez gene - 642612     See in Manteia.
RefSeq - NM_001195234
RefSeq - XM_017018126
RefSeq Peptide - NP_001182163
swissprot - P0CI26
Ensembl - ENSG00000204449
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P0CI25 / TRIM49 / tripartite motif containing 49ENSG0000016893099
A6NDI0 / TRIM49B / tripartite motif containing 49BENSG0000018205395
C9J1S8 / TRIM49D2 / tripartite motif containing 49D2ENSG0000023380285
C9J1S8 / TRIM49D1 / tripartite motif containing 49D1ENSG0000022341785
Q9BSJ1 / TRIM51 / tripartite motif-containing 51ENSG0000012490075
Q96BQ3 / TRIM43 / tripartite motif containing 43ENSG0000014401552
A6NCK2 / TRIM43B / tripartite motif containing 43BENSG0000014401052
TRIM64C / tripartite motif containing 64CENSG0000021489146
A6NGJ6 / TRIM64 / tripartite motif containing 64ENSG0000020445046
A6NI03 / TRIM64B / tripartite motif containing 64BENSG0000018925346
I1YAP6 / TRIM77 / tripartite motif containing 77ENSG0000021441443
Q8IWZ4 / TRIM48 / tripartite motif containing 48ENSG0000015024440
Q8N9V2 / TRIML1 / tripartite motif family like 1ENSG0000018410831
Q8N7C3 / TRIML2 / tripartite motif family like 2ENSG0000017904625


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr