ENSG00000223417


Homo sapiens

Features
Gene ID: ENSG00000223417
  
Biological name :TRIM49D1
  
Synonyms : C9J1S8 / TRIM49D1 / tripartite motif containing 49D1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q14.3
Gene start: 89911111
Gene end: 89921767
  
Corresponding Affymetrix probe sets: 220534_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000474678
Ensembl peptide - ENSP00000479562
Ensembl peptide - ENSP00000474850
NCBI entrez gene - 399939     See in Manteia.
RefSeq - NM_001206627
RefSeq - XM_011542816
RefSeq Peptide - NP_001193556
swissprot - C9J1S8
swissprot - A0A087WVN7
Ensembl - ENSG00000223417
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
C9J1S8 / TRIM49D2 / tripartite motif containing 49D2ENSG00000233802100
P0CI25 / TRIM49 / tripartite motif containing 49ENSG0000016893085
A6NDI0 / TRIM49B / tripartite motif containing 49BENSG0000018205385
P0CI26 / TRIM49C / tripartite motif containing 49CENSG0000020444985
Q9BSJ1 / TRIM51 / tripartite motif-containing 51ENSG0000012490074
Q96BQ3 / TRIM43 / tripartite motif containing 43ENSG0000014401551
A6NCK2 / TRIM43B / tripartite motif containing 43BENSG0000014401050
A6NI03 / TRIM64B / tripartite motif containing 64BENSG0000018925345
A6NGJ6 / TRIM64 / tripartite motif containing 64ENSG0000020445045
TRIM64C / tripartite motif containing 64CENSG0000021489144
Q8IWZ4 / TRIM48 / tripartite motif containing 48ENSG0000015024444
I1YAP6 / TRIM77 / tripartite motif containing 77ENSG0000021441442
Q8N9V2 / TRIML1 / tripartite motif family like 1ENSG0000018410831
Q8N7C3 / TRIML2 / tripartite motif family like 2ENSG0000017904622


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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