ENSG00000205899


Homo sapiens

Features
Gene ID: ENSG00000205899
  
Biological name :BHLHA9
  
Synonyms : basic helix-loop-helix family member a9 / BHLHA9 / Q7RTU4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.3
Gene start: 1270559
Gene end: 1271460
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000375248
NCBI entrez gene - 727857     See in Manteia.
OMIM - 615416
RefSeq - NM_001164405
RefSeq Peptide - NP_001157877
swissprot - Q7RTU4
Ensembl - ENSG00000205899
  
Related genetic diseases (OMIM): 607539 - ?Camptosynpolydactyly, complex, 607539
  609432 - Syndactyly, mesoaxial synostotic, with phalangeal reduction, 609432

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bhlha9ENSDARG00000103981Danio rerio
 Bhlha9ENSMUSG00000044243Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR036638  Helix-loop-helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IDA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000396 Overfolded helices "A condition in which the upper edge of the ear is folded over to a greater degree than normal." [HPO:curators]
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 HP:0000954 Transverse palmar creases "The presence of a single palmar crease (instead of the two palmar creases that are typically present)." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001177 Preaxial polydactyly (hands) "Supernumerary digits located at the radial side of the hand. Polydactyly (supernumerary digits) involving the thumb occurs in many distinct forms of high variability and severity. Ranging from fleshy nubbins over varying degrees of partial duplication/splitting to completely duplicated or even triplicated thumbs or preaxial (on the radial side of the hand) supernumerary digits." [HPO:curators]
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 HP:0001376 Decreased mobility of joints 
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 HP:0001539 Omphalocele 
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 HP:0001792 Nail hypoplasia "Underdeveloped `fingernails` (FMA:54327) or `toenails` (FMA:54328)." [HPO:probinson]
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 HP:0002980 Femoral bowing "Bowing (abnormal curvature) of the femur." [HPO:curators]
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 HP:0003038 Fibular hypoplasia "Underdevelopment of the fibula." [HPO:curators]
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 HP:0003097 Short femur "An abnormal shortening of the thigh bones." [HPO:curators]
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004279 Hypoplastic hand 
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 HP:0004691 2-3 toe syndactyly "`Syndactyly` (HP:0001159) with fusion of toes two and three." [HPO:sdoelken]
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 HP:0005048 fusion of carpal bones, especially capitate and hamate 
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 HP:0005772 Aplasia/Hypoplasia of the tibia "Absence or underdevelopment of the tibia." [HPO:curators]
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 HP:0006097 3-4 finger syndactyly "`Syndactyly` (HP:0001159) with fusion of fingers three and four." [HPO:sdoelken]
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006443 Patellar aplasia "Absence of the patella." [HPO:curators]
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 HP:0006495 Aplasia/Hypoplasia of the ulna "Absence or underdevelopment of the ulna." [HPO:curators]
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 HP:0008362 Aplasia/Hypoplasia of the hallux "Absence or underdevelopment of the big toe." [HPO:curators]
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 HP:0009161 Aplasia/Hypoplasia of the middle phalanx of the 5th finger "Absence or underdevelopment (hypoplasia) of the middle phalanx of the little (5th) finger." [HPO:curators]
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 HP:0009177 Symphalangism of the middle and proximal phalanges of the 5th finger "Fusion of the proximal and middle phalanges of the 5th finger." [HPO:curators]
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 HP:0009568 Aplasia/Hypoplasia of the middle phalanx of the 2nd finger 
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 HP:0009601 Aplasia/Hypoplasia of the thumb "Hypoplastic/small or absent thumb." [HPO:curators]
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 HP:0009701 Synostosis involving the metacarpal bones "Fusion involving two or more metacarpal bones (A synostosis of the first metacarpal and the proximal phalanx of the thumb can also be observed, note that the first metacarpal bone corresponds to a proximal phalanx)." [HPO:curators]
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 HP:0009756 Popliteal pterygium "A pterygium (or pterygia) occuring in the popliteal region (the back of the knee)." [HPO:curators]
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 HP:0009773 Symphalangism affecting the phalanges of the hand "Fusion of two or more phalangeal bones of the hand." [HPO:curators]
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 HP:0009778 Hypoplastic/small thumb 
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 HP:0009843 Aplasia/Hypoplasia of the middle phalanges of the hand 
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 HP:0010064 Symphalangism affecting the phalanges of the hallux 
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 HP:0010109 Hypoplastic/small hallux 
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 HP:0010442 Polydactyly 
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 HP:0012385 Camptodactyly "The distal interphalangeal joint and/or the proximal interphalangeal joint of the fingers or toes cannot be extended to 180 degrees by either active or passive extension." [HPO:probinson]
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 HP:0012725 Cutaneous syndactyly "A soft tissue continuity in the A/P axis between two digits that extends distally to at least the level of the proximal interphalangeal joints, or a soft tissue continuity in the A/P axis between two digits that lies significantly distal to the flexion crease that overlies the metacarpophalangeal or metatarsophalangeal joint of the adjacent digits." [HPO:probinson]
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 HP:0100797 Toenail dysplasia "An abnormality of the development of the toenails." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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