ENSMUSG00000044243


Mus musculus

Features
Gene ID: ENSMUSG00000044243
  
Biological name :Bhlha9
  
Synonyms : Bhlha9 / Class A basic helix-loop-helix protein 9 / Q5RJB0
  
Possible biological names infered from orthology : basic helix-loop-helix family member a9 / Q7RTU4
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B5
Gene start: 76672470
Gene end: 76673676
  
Corresponding Affymetrix probe sets: 10378785 (MoGene1.0st)   1446501_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000050516
NCBI entrez gene - 320522     See in Manteia.
MGI - MGI:2444198
RefSeq - NM_177182
RefSeq Peptide - NP_796156
swissprot - Q5RJB0
Ensembl - ENSMUSG00000044243
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bhlha9ENSDARG00000103981Danio rerio
 BHLHA9ENSG00000205899Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR036638  Helix-loop-helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000564 syndactyly "any degree of webbing or fusion of the digits, may involve only soft tissues or also can include bone" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Kcnn2bc-6J/Kcnn2bc-6J
Genetic Background: C57BL/6J-Kcnn2bc-6J/GrsrJ

 MP:0000571 interdigital webbing "fold of skin, or web, between the toes that is not normally present" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
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Allelic Composition: Kcnn2bc-6J/Kcnn2bc-6J
Genetic Background: C57BL/6J-Kcnn2bc-6J/GrsrJ

 MP:0009874 abnormal interdigital cell death "change in the expected number of cells undergoing programmed cell death (apoptosis) in the autopod during development, precluding the sculpting of normal digits" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
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Allelic Composition: Kcnn2bc-6J/Kcnn2bc-6J
Genetic Background: C57BL/6J-Kcnn2bc-6J/GrsrJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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