ENSG00000215421


Homo sapiens

Features
Gene ID: ENSG00000215421
  
Biological name :ZNF407
  
Synonyms : Q9C0G0 / zinc finger protein 407 / ZNF407
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 18
Strand: 1
Band: q22.3
Gene start: 74597870
Gene end: 75065671
  
Corresponding Affymetrix probe sets: 220835_s_at (Human Genome U133 Plus 2.0 Array)   220836_at (Human Genome U133 Plus 2.0 Array)   227768_at (Human Genome U133 Plus 2.0 Array)   234844_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000463270
Ensembl peptide - ENSP00000462348
Ensembl peptide - ENSP00000479246
Ensembl peptide - ENSP00000481798
Ensembl peptide - ENSP00000299687
Ensembl peptide - ENSP00000310359
NCBI entrez gene - 55628     See in Manteia.
OMIM - 615894
RefSeq - XM_017025838
RefSeq - NM_017757
RefSeq - XM_005266726
RefSeq - XM_006722500
RefSeq - XM_011526068
RefSeq - XM_011526069
RefSeq - XM_011526070
RefSeq - NM_001146189
RefSeq - NM_001146190
RefSeq Peptide - NP_060227
RefSeq Peptide - NP_001139661
RefSeq Peptide - NP_001139662
swissprot - A0A087WYH1
swissprot - Q9C0G0
swissprot - A0A087WV78
Ensembl - ENSG00000215421
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNF407ENSGALG00000036128Gallus gallus
 Zfp407ENSMUSG00000048410Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
REST / Q13127 / RE1 silencing transcription factorENSG000000840936


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR026939  At2g23090-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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