ENSG00000228049


Homo sapiens

Features
Gene ID: ENSG00000228049
  
Biological name :POLR2J2
  
Synonyms : POLR2J2 / Q9GZM3 / RNA polymerase II subunit J2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q22.1
Gene start: 102665368
Gene end: 102671629
  
Corresponding Affymetrix probe sets: 1552621_at (Human Genome U133 Plus 2.0 Array)   1552622_s_at (Human Genome U133 Plus 2.0 Array)   212782_x_at (Human Genome U133 Plus 2.0 Array)   214740_at (Human Genome U133 Plus 2.0 Array)   228823_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000330898
Ensembl peptide - ENSP00000351218
NCBI entrez gene - 246721     See in Manteia.
OMIM - 609881
RefSeq - NM_032959
RefSeq Peptide - NP_116581
swissprot - A6NFM0
swissprot - Q9GZM3
Ensembl - ENSG00000228049
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polr2jENSDARG00000035146Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC105052.3ENSG00000267645100
POLR2J3 / RNA polymerase II subunit J3ENSG0000028543799
Q9H1A7 / POLR2J3 / RNA polymerase II subunit J3ENSG0000016825599
P52435 / POLR2J / RNA polymerase II subunit JENSG0000000507590


Protein motifs (from Interpro)
Interpro ID Name
 IPR008193  DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site
 IPR009025  DNA-directed RNA polymerase, RBP11-like dimerisation domain
 IPR036603  RNA polymerase, RBP11-like subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005665 DNA-directed RNA polymerase II, core complex IBA
 molecular_functionGO:0001055 RNA polymerase II activity IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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