ENSG00000241476


Homo sapiens

Features
Gene ID: ENSG00000241476
  
Biological name :SSX2
  
Synonyms : Q16385 / SSX2 / SSX family member 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: p11.22
Gene start: 52696896
Gene end: 52707189
  
Corresponding Affymetrix probe sets: 207493_x_at (Human Genome U133 Plus 2.0 Array)   210497_x_at (Human Genome U133 Plus 2.0 Array)   215881_x_at (Human Genome U133 Plus 2.0 Array)   215885_at (Human Genome U133 Plus 2.0 Array)   216471_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000338561
Ensembl peptide - ENSP00000338796
NCBI entrez gene - 6757     See in Manteia.
OMIM - 300192
RefSeq - NM_003147
RefSeq - NM_001278697
RefSeq - NM_175698
RefSeq Peptide - NP_001265626
RefSeq Peptide - NP_003138
RefSeq Peptide - NP_783629
swissprot - Q16385
Ensembl - ENSG00000241476
  
Related genetic diseases (OMIM): 300813 - ?Sarcoma, synovial, 300813
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Gm14459ENSMUSG00000079704Mus musculus
 Gm21876ENSMUSG00000095316Mus musculus
 Gm5751ENSMUSG00000079697Mus musculus
 Gm6592ENSMUSG00000079699Mus musculus
 Ssx9ENSMUSG00000035371Mus musculus
 Ssxa1ENSMUSG00000062814Mus musculus
 Ssxb1ENSMUSG00000079705Mus musculus
 Ssxb10ENSMUSG00000068219Mus musculus
 Ssxb2ENSMUSG00000023165Mus musculus
 Ssxb3ENSMUSG00000079701Mus musculus
 Ssxb5ENSMUSG00000071816Mus musculus
 Ssxb6ENSMUSG00000079702Mus musculus
 Ssxb8ENSMUSG00000079703Mus musculus
 Ssxb9ENSMUSG00000068218Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SSX2B / Q16385 / SSX family member 2BENSG00000268447100
SSX3 / Q99909 / SSX family member 3ENSG0000016558465
SSX7 / Q7RTT5 / SSX family member 7ENSG0000018775461
SSX5 / O60225 / SSX family member 5ENSG0000016558361
SSX4B / O60224 / SSX family member 4BENSG0000026979157
SSX4 / O60224 / SSX family member 4ENSG0000026800957
SSX1 / Q16384 / SSX family member 1ENSG0000012675254


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003655  Krueppel-associated box-related
 IPR019041  SSXRD motif
 IPR028804  SSX
 IPR036051  KRAB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated NAS
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0001428 Somatic mutation 
Show

 HP:0012570 Synovial sarcoma "A type of mesenchymal tissue cell tumor that exhibits epithelial differentiation, which most frequently arises in the extremities." [HPO:probinson]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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