ENSG00000268447


Homo sapiens

Features
Gene ID: ENSG00000268447
  
Biological name :SSX2B
  
Synonyms : Q16385 / SSX2B / SSX family member 2B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: p11.22
Gene start: 52751132
Gene end: 52790305
  
Corresponding Affymetrix probe sets: 207493_x_at (Human Genome U133 Plus 2.0 Array)   210497_x_at (Human Genome U133 Plus 2.0 Array)   216471_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000470740
Ensembl peptide - ENSP00000477922
Ensembl peptide - ENSP00000478714
NCBI entrez gene - 727837     See in Manteia.
RefSeq - NM_001278701
RefSeq - NM_001164417
RefSeq - NM_001278702
RefSeq Peptide - NP_001157889
RefSeq Peptide - NP_001265630
RefSeq Peptide - NP_001265631
swissprot - Q16385
Ensembl - ENSG00000268447
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Gm14459ENSMUSG00000079704Mus musculus
 Gm21876ENSMUSG00000095316Mus musculus
 Gm5751ENSMUSG00000079697Mus musculus
 Gm6592ENSMUSG00000079699Mus musculus
 Ssx9ENSMUSG00000035371Mus musculus
 Ssxa1ENSMUSG00000062814Mus musculus
 Ssxb1ENSMUSG00000079705Mus musculus
 Ssxb10ENSMUSG00000068219Mus musculus
 Ssxb2ENSMUSG00000023165Mus musculus
 Ssxb3ENSMUSG00000079701Mus musculus
 Ssxb5ENSMUSG00000071816Mus musculus
 Ssxb6ENSMUSG00000079702Mus musculus
 Ssxb8ENSMUSG00000079703Mus musculus
 Ssxb9ENSMUSG00000068218Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SSX2 / Q16385 / SSX family member 2ENSG00000241476100
SSX3 / Q99909 / SSX family member 3ENSG0000016558465
SSX7 / Q7RTT5 / SSX family member 7ENSG0000018775461
SSX5 / O60225 / SSX family member 5ENSG0000016558361
SSX4B / O60224 / SSX family member 4BENSG0000026979157
SSX4 / O60224 / SSX family member 4ENSG0000026800957
SSX1 / Q16384 / SSX family member 1ENSG0000012675254


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003655  Krueppel-associated box-related
 IPR019041  SSXRD motif
 IPR028804  SSX
 IPR036051  KRAB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated NAS
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr