ENSG00000241945


Homo sapiens

Features
Gene ID: ENSG00000241945
  
Biological name :PWP2
  
Synonyms : PWP2 / PWP2, small subunit processome component / Q15269
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: 1
Band: q22.3
Gene start: 44107290
Gene end: 44131181
  
Corresponding Affymetrix probe sets: 1565603_at (Human Genome U133 Plus 2.0 Array)   1565604_at (Human Genome U133 Plus 2.0 Array)   209336_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000411749
Ensembl peptide - ENSP00000291576
NCBI entrez gene - 102724159     See in Manteia.
NCBI entrez gene - 5822     See in Manteia.
OMIM - 601475
RefSeq - XM_011508903
RefSeq - NM_005049
RefSeq - XM_011529667
RefSeq Peptide - NP_005040
swissprot - Q15269
swissprot - C9J544
Ensembl - ENSG00000241945
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pwp2hENSDARG00000037109Danio rerio
 ENSGALG00000045726Gallus gallus
 Pwp2ENSMUSG00000032834Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FP565260.1ENSG00000275464100


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR007148  Small-subunit processome, Utp12
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR027145  Periodic tryptophan protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000028 ribosomal small subunit assembly IBA
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034388 Pwp2p-containing subcomplex of 90S preribosome IBA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030515 snoRNA binding IBA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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