ENSG00000248385


Homo sapiens

Features
Gene ID: ENSG00000248385
  
Biological name :TARM1
  
Synonyms : B6A8C7 / TARM1 / T cell-interacting, activating receptor on myeloid cells 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.42
Gene start: 54069895
Gene end: 54081365
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000439454
Ensembl peptide - ENSP00000484383
NCBI entrez gene - 441864     See in Manteia.
OMIM - 616802
RefSeq - XM_005278278
RefSeq - NM_001135686
RefSeq - NM_001330650
RefSeq Peptide - NP_001129158
RefSeq Peptide - NP_001317579
swissprot - B6A8C7
swissprot - A0A087X1Q6
Ensembl - ENSG00000248385
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IGSF1L3ENSGALG00000030005Gallus gallus
 Tarm1ENSMUSG00000053338Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OSCAR / Q8IYS5 / osteoclast associated, immunoglobulin-like receptorENSG0000017090927
IGSF1 / Q8N6C5 / immunoglobulin superfamily member 1ENSG0000014725523
A1BG / P04217 / alpha-1-B glycoproteinENSG0000012141018


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002250 adaptive immune response IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:2000515 negative regulation of CD4-positive, alpha-beta T cell activation IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0035579 specific granule membrane TAS
 cellular_componentGO:0070821 tertiary granule membrane TAS
 molecular_functionGO:0034987 immunoglobulin receptor binding IPI


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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