ENSGALG00000030005


Gallus gallus

Features
Gene ID: ENSGALG00000030005
  
Biological name :IGSF1L3
  
Synonyms : IGSF1L3
  
Possible biological names infered from orthology : A1BG / alpha-1-B glycoprotein / B6A8C7 / B6A8R8 / IGSF1 / immunoglobulin superfamily member 1 / OSCAR / osteoclast associated, immunoglobulin-like receptor / P04217 / Q19LI2 / Q7TQA1 / Q8IYS5 / Q8N6C5 / Q8VBT3 / TARM1 / T cell-interacting, activating receptor on myeloid cells 1 / T-cell-interacting, activating receptor on myeloid cells protein 1
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 65206
Gene end: 68264
  
Corresponding Affymetrix probe sets: Gga.7064.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047772
Ensembl peptide - ENSGALP00000055077
NCBI entrez gene - 419114     See in Manteia.
RefSeq - XM_015296223
RefSeq - XM_015296220
RefSeq - XM_015296221
RefSeq - XM_015296222
RefSeq - NM_001145226
RefSeq - XM_015296218
RefSeq - XM_015296219
RefSeq Peptide - NP_001138698
swissprot - A0A1D5PQB5
swissprot - A0A1D5P508
Ensembl - ENSGALG00000030005
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A1BGENSG00000121410Homo sapiens
 IGSF1ENSG00000147255Homo sapiens
 OSCARENSG00000170909Homo sapiens
 TARM1ENSG00000248385Homo sapiens
 A1bgENSMUSG00000022347Mus musculus
 Igsf1ENSMUSG00000031111Mus musculus
 OscarENSMUSG00000054594Mus musculus
 Tarm1ENSMUSG00000053338Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr