ENSG00000256525


Homo sapiens

Features
Gene ID: ENSG00000256525
  
Biological name :POLG2
  
Synonyms : DNA polymerase gamma 2, accessory subunit / POLG2 / Q9UHN1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q23.3
Gene start: 64477785
Gene end: 64497036
  
Corresponding Affymetrix probe sets: 205811_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000464389
Ensembl peptide - ENSP00000442563
Ensembl peptide - ENSP00000462071
NCBI entrez gene - 11232     See in Manteia.
OMIM - 604983
RefSeq - XM_017024072
RefSeq - NM_007215
RefSeq Peptide - NP_009146
swissprot - J3QRU9
swissprot - E5KS15
swissprot - Q9UHN1
swissprot - J3KRM2
Ensembl - ENSG00000256525
  
Related genetic diseases (OMIM): 610131 - Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 4, 610131
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polg2ENSDARG00000074933Danio rerio
 POLG2ENSGALG00000003520Gallus gallus
 Polg2ENSMUSG00000020718Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004154  Anticodon-binding
 IPR027030  DNA polymerase subunit gamma-2, mitochondrial
 IPR027031  Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2
 IPR036621  Anticodon-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006261 DNA-dependent DNA replication TAS
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0007005 mitochondrion organization TAS
 biological_processGO:0022904 respiratory electron transport chain IEA
 biological_processGO:0032042 mitochondrial DNA metabolic process IEA
 biological_processGO:0070150 mitochondrial glycyl-tRNA aminoacylation IBA
 biological_processGO:0070584 mitochondrion morphogenesis IEA
 biological_processGO:0071897 DNA biosynthetic process IEA
 cellular_componentGO:0000262 mitochondrial chromosome TAS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0042645 mitochondrial nucleoid IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003887 DNA-directed DNA polymerase activity TAS
 molecular_functionGO:0004820 glycine-tRNA ligase activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
Transcriptional activation of mitochondrial biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000590 External ophthalmoplegia, progressive (PEO) 
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 HP:0000833 Glucose intolerance 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0002019 Constipation 
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002578 Gastroparesis 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003323 Muscle weakness, progressive 
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003546 Exercise intolerance 
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 HP:0003581 Onset in adulthood 
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 HP:0003676 Progressive disorder 
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 HP:0003688 Muscle biopsy shows decreased activity of cytochrome C oxidase 
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 HP:0003689 Muscle biopsy shows multiple mitochondrial DNA (mtDNA) deletions 
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0100704 Cortical visual impairment "A form of loss of vision caused by damage to the visual cortex rather than a defect in the eye." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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