ENSGALG00000000474


Gallus gallus

Features
Gene ID: ENSGALG00000000474
  
Biological name :RPL36
  
Synonyms : 60S ribosomal protein L36 / Q98TF6 / RPL36
  
Possible biological names infered from orthology : Q9Y3U8 / ribosomal protein L36 / Rpl36-ps4
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 662317
Gene end: 665141
  
Corresponding Affymetrix probe sets: Gga.80.1.S1_at (Chicken Array)   Gga.80.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061004
Ensembl peptide - ENSGALP00000062958
Ensembl peptide - ENSGALP00000062009
Ensembl peptide - ENSGALP00000000643
Ensembl peptide - ENSGALP00000059330
NCBI entrez gene - 373936     See in Manteia.
RefSeq - NM_204140
RefSeq - XM_015299663
RefSeq - XM_015299662
RefSeq Peptide - NP_989471
swissprot - A0A1L1RT67
swissprot - Q98TF6
swissprot - F1NP48
swissprot - A0A1L1RQD4
Ensembl - ENSGALG00000000474
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl36ENSDARG00000100588Danio rerio
 RPL36ENSG00000130255Homo sapiens
 Rpl36ENSMUSG00000057863Mus musculus
 Rpl36-ps4ENSMUSG00000093922Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000509  Ribosomal protein L36e


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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