ENSGALG00000000838


Gallus gallus

Features
Gene ID: ENSGALG00000000838
  
Biological name :THAP12
  
Synonyms : THAP12 / THAP domain containing 12
  
Possible biological names infered from orthology : O43422 / Q9CUX1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 193796220
Gene end: 193809102
  
Corresponding Affymetrix probe sets: GgaAffx.20873.1.S1_at (Chicken Array)   GgaAffx.555.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001227
NCBI entrez gene - 428122     See in Manteia.
RefSeq - XM_425679
swissprot - E1C7U9
Ensembl - ENSGALG00000000838
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thap12aENSDARG00000042489Danio rerio
 thap12bENSDARG00000020964Danio rerio
 O43422ENSG00000137492Homo sapiens
 Q9CUX1ENSMUSG00000030753Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006612  THAP-type zinc finger
 IPR008906  HAT, C-terminal dimerisation domain
 IPR025398  Domain of unknown function DUF4371


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr