ENSGALG00000001223


Gallus gallus

Features
Gene ID: ENSGALG00000001223
  
Biological name :PEX10
  
Synonyms : peroxisomal biogenesis factor 10 / PEX10
  
Possible biological names infered from orthology : B1AUE5 / O60683 / Peroxisome biosis factor 10
  
Species: Gallus gallus
  
Chr. number: 21
Strand: 1
Band:
Gene start: 1536289
Gene end: 1539949
  
Corresponding Affymetrix probe sets: Gga.10449.1.S1_at (Chicken Array)   Gga.10449.1.S1_s_at (Chicken Array)   Gga.7879.1.S1_a_at (Chicken Array)   Gga.7879.2.S1_at (Chicken Array)   Gga.8468.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001853
Ensembl peptide - ENSGALP00000062247
Ensembl peptide - ENSGALP00000062159
Ensembl peptide - ENSGALP00000058942
Ensembl peptide - ENSGALP00000056782
NCBI entrez gene - 419396     See in Manteia.
RefSeq - NM_001198654
RefSeq Peptide - NP_001185583
swissprot - A0A1L1RTM0
swissprot - E1BST1
swissprot - A0A1D5PV23
swissprot - A0A1L1RJL7
swissprot - A0A1L1RTV5
Ensembl - ENSGALG00000001223
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pex10ENSDARG00000041511Danio rerio
 PEX10ENSG00000157911Homo sapiens
 Pex10ENSMUSG00000029047Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR006845  Pex, N-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR025654  Peroxisome biogenesis factor 10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007031 peroxisome organization IEA
 biological_processGO:0016558 protein import into peroxisome matrix IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005778 peroxisomal membrane IBA
 cellular_componentGO:0005779 integral component of peroxisomal membrane IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
E3 ubiquitin ligases ubiquitinate target proteins
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr