ENSGALG00000001634


Gallus gallus

Features
Gene ID: ENSGALG00000001634
  
Biological name :RPL23
  
Synonyms : Gallus gallus ribosomal protein L23 (RPL23), mRNA. / RPL23
  
Possible biological names infered from orthology : 60S ribosomal protein L23 / P62829 / P62830 / ribosomal protein L23
  
Species: Gallus gallus
  
Chr. number: 27
Strand: -1
Band:
Gene start: 4463076
Gene end: 4465031
  
Corresponding Affymetrix probe sets: Gga.1068.1.S1_at (Chicken Array)   Gga.17972.1.S1_x_at (Chicken Array)   Gga.17972.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002493
Ensembl peptide - ENSGALP00000064587
Ensembl peptide - ENSGALP00000050997
Ensembl peptide - ENSGALP00000050039
Ensembl peptide - ENSGALP00000048562
NCBI entrez gene - 420001     See in Manteia.
RefSeq - NM_001321599
RefSeq - XM_418122
RefSeq Peptide - NP_001308528
swissprot - A0A1D5PBB4
swissprot - E1BY89
swissprot - A0A1D5P776
swissprot - A0A1L1S0C8
swissprot - A0A1D5PDZ9
Ensembl - ENSGALG00000001634
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl23ENSDARG00000053457Danio rerio
 RPL23ENSG00000125691Homo sapiens
 Rpl23ENSMUSG00000071415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000218  Ribosomal protein L14P
 IPR019972  Ribosomal protein L14P, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0032986 protein-DNA complex disassembly IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0050821 protein stabilization IEA
 biological_processGO:0071157 negative regulation of cell cycle arrest IEA
 biological_processGO:0071158 positive regulation of cell cycle arrest IEA
 biological_processGO:0072717 cellular response to actinomycin D IEA
 biological_processGO:1901798 positive regulation of signal transduction by p53 class mediator IEA
 biological_processGO:1904667 negative regulation of ubiquitin protein ligase activity IEA
 biological_processGO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0001223 transcription coactivator binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0070180 large ribosomal subunit rRNA binding IBA
 molecular_functionGO:1990948 ubiquitin ligase inhibitor activity IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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