ENSGALG00000002070


Gallus gallus

Features
Gene ID: ENSGALG00000002070
  
Biological name :SAP130
  
Synonyms : histone deacetylase complex subunit SAP130 / SAP130
  
Possible biological names infered from orthology : Mus musculus Sin3A associated protein (Sap130), transcript variant 2, mRNA. / Q9H0E3 / Sin3A associated protein 130
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 1471116
Gene end: 1490604
  
Corresponding Affymetrix probe sets: GgaAffx.1363.1.S1_at (Chicken Array)   GgaAffx.1367.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003216
Ensembl peptide - ENSGALP00000060590
Ensembl peptide - ENSGALP00000056536
NCBI entrez gene - 424756     See in Manteia.
RefSeq - XM_015276866
RefSeq - XM_015276868
RefSeq - XM_015276867
RefSeq - NM_001031301
RefSeq Peptide - NP_001026472
swissprot - E1BRK2
swissprot - A0A1D5PUD3
swissprot - A0A1L1RP89
Ensembl - ENSGALG00000002070
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sap130aENSDARG00000056924Danio rerio
 sap130bENSDARG00000079352Danio rerio
 Q9H0E3ENSG00000136715Homo sapiens
 Sap130ENSMUSG00000024260Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024137  Histone deacetylase complex subunit SAP130
 IPR031963  Histone deacetylase complex subunit SAP130, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0016607 nuclear speck IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr