ENSGALG00000002644


Gallus gallus

Features
Gene ID: ENSGALG00000002644
  
Biological name :RPL10A
  
Synonyms : ribosomal protein L10a / RPL10A
  
Possible biological names infered from orthology : P62906
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 4130724
Gene end: 4134398
  
Corresponding Affymetrix probe sets: Gga.4632.1.S1_a_at (Chicken Array)   Gga.4632.1.S1_s_at (Chicken Array)   Gga.4632.4.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004159
Ensembl peptide - ENSGALP00000063523
Ensembl peptide - ENSGALP00000058884
NCBI entrez gene - 419895     See in Manteia.
RefSeq - XM_015299014
RefSeq - XM_418020
swissprot - A0A1L1RXE5
swissprot - A0A1L1RJF1
swissprot - F6SU35
Ensembl - ENSGALG00000002644
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6PC69ENSDARG00000042905Danio rerio
 P62906ENSG00000198755Homo sapiens
 Rpl10aENSMUSG00000037805Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002143  Ribosomal protein L1
 IPR016095  Ribosomal protein L1, 3-layer alpha/beta-sandwich
 IPR023673  Ribosomal protein L1, conserved site
 IPR023674  Ribosomal protein L1-like
 IPR028364  Ribosomal protein L1/ribosomal biogenesis protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0002181 cytoplasmic translation IEA
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IEA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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