ENSMUSG00000037805


Mus musculus

Features
Gene ID: ENSMUSG00000037805
  
Biological name :Rpl10a
  
Synonyms : ribosomal protein L10A / Rpl10a
  
Possible biological names infered from orthology : P62906
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: A3.3
Gene start: 28328471
Gene end: 28331032
  
Corresponding Affymetrix probe sets: 10355173 (MoGene1.0st)   10407535 (MoGene1.0st)   10410063 (MoGene1.0st)   10443360 (MoGene1.0st)   1431177_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000048469
Ensembl peptide - ENSMUSP00000114141
NCBI entrez gene - 19896     See in Manteia.
MGI - MGI:1343877
RefSeq - XM_006523922
RefSeq - NM_001357628
RefSeq - NM_011287
RefSeq Peptide - NP_001344557
RefSeq Peptide - NP_035417
swissprot - Q5XJF6
swissprot - D6RE43
Ensembl - ENSMUSG00000037805
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6PC69ENSDARG00000042905Danio rerio
 RPL10AENSGALG00000002644Gallus gallus
 P62906ENSG00000198755Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002143  Ribosomal protein L1
 IPR023673  Ribosomal protein L1, conserved site
 IPR023674  Ribosomal protein L1-like
 IPR028364  Ribosomal protein L1/ribosomal biogenesis protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0045471 response to ethanol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IEA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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